--- Begin Message ---
|
Subject: |
[PATCH] gnu: Add r-tgstat. |
|
Date: |
Sun, 22 Oct 2017 13:56:07 +0200 |
* gnu/packages/statistics.scm (r-tgstat): New variable.
---
gnu/packages/statistics.scm | 35 +++++++++++++++++++++++++++++++++++
1 file changed, 35 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index b3ebd5abb..6c8f7b5fa 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -27,6 +27,7 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix download)
+ #:use-module (guix hg-download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system r)
@@ -5442,3 +5443,37 @@ the least concave majorant (LCM), for the half-normal
and correlation
distributions, and for computing empirical higher criticism (HC) scores and
the corresponding decision threshold.")
(license license:gpl3+)))
+
+(define-public r-tgstat
+ (let ((changeset "4f8e60c03598f49aff6f5beeab40f2b995377e9f")
+ (revision "1"))
+ (package
+ (name "r-tgstat")
+ (version (string-append "1.0.2-" revision "." (string-take changeset 7)))
+ (source
+ (origin
+ (method hg-fetch)
+ (uri (hg-reference
+ (url "https://bitbucket.org/tanaylab/tgstat";)
+ (changeset changeset)))
+ (sha256
+ (base32
+ "0ilkkyximy77zbncm91kdfqbxf0qyndg16pd3q3p6a3xc9qcmxvn"))))
+ (build-system r-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-isnan
+ (lambda _
+ (substitute* "src/tgstat.h"
+ (("#define isnan ::isnan")
+ "#define isnan std::isnan"))
+ #t)))))
+ (propagated-inputs
+ `(("r-rcpp" ,r-rcpp)))
+ (home-page "https://bitbucket.org/tanaylab/tgstat/";)
+ (synopsis "Tanay's group statistical utilities")
+ (description
+ "The goal of tgstat is to provide fast and efficient statistical
+tools.")
+ (license license:gpl2))))
--
2.14.1
--- End Message ---
--- Begin Message ---
|
Subject: |
Re: [bug#28986] [PATCH] gnu: Add r-tgstat. |
|
Date: |
Mon, 30 Oct 2017 12:12:04 +0100 |
|
User-agent: |
mu4e 0.9.18; emacs 25.3.1 |
Ricardo Wurmus <address@hidden> writes:
> Ludovic Courtès <address@hidden> writes:
>
>> Hi,
>>
>> Ricardo Wurmus <address@hidden> skribis:
>>
>>> * gnu/packages/statistics.scm (r-tgstat): New variable.
>>
>> [...]
>>
>>> + (home-page "https://bitbucket.org/tanaylab/tgstat/";)
>>> + (synopsis "Tanay's group statistical utilities")
>>> + (description
>>> + "The goal of tgstat is to provide fast and efficient statistical
>>> +tools.")
>>
>> It would be nice to elaborate, but otherwise LGTM.
>
> Yes, I agree. Like many R packages this is just a bunch of unrelated
> functions that are generic enough to get their own package. Having so
> many of these packages is a cultural problem in R…
I pushed it to master as is. Closing.
--
Ricardo
GPG: BCA6 89B6 3655 3801 C3C6 2150 197A 5888 235F ACAC
https://elephly.net
--- End Message ---