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Re: [ESPResSo] Visualization of different bonds


From: Olaf Lenz
Subject: Re: [ESPResSo] Visualization of different bonds
Date: Fri, 02 Apr 2010 10:52:29 +0200
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Hi!

On 04/01/2010 11:21 PM, samira jamalian wrote:
> I am working on a system that contains different types of particles
> which have different bonds with each other. As the bonds are created I
> want to see the pattern that a certain bond is distributed. Currently I
> am using the vtf file but VMD can not open it. Do you have any
> suggestion about this problem? Should I use other formats like PDB?

Your description is to scarce to be able to identify the problem. Could
you please send the script that you are using? Or at least the VTF file
that was created? What does VMD do when it tries to open it? Does it
give an error message?

Olaf


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