[Gsrc-commit] trunk r4764: update samtools to 1.5

[Carl Hansen]

------------------------------------------------------------
revno: 4764
revision-id: address@hidden
parent: address@hidden
committer: address@hidden
branch nick: trunk
timestamp: Fri 2017-09-22 21:22:17 -0700
message:
  update samtools to 1.5
modified:
  pkg/bio/samtools/Makefile      makefile-20160617195624-kwz1a09vkg4le6fu-176
  pkg/bio/samtools/sha256sums    sha256sums-20160617195624-kwz1a09vkg4le6fu-177

=== modified file 'pkg/bio/samtools/Makefile'
--- a/pkg/bio/samtools/Makefile 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/samtools/Makefile 2017-09-23 04:22:17 +0000
@@ -1,4 +1,5 @@
 # Copyright © 2014 Brandon Invergo <address@hidden>
+# Copyright © 2017 Carl Hansen <address@hidden>
 #
 # This file is part of BioSRC.
 #
@@ -17,7 +18,7 @@
 
 NAME = SAMtools
 GARNAME = samtools
-GARVERSION = 1.1
+GARVERSION = 1.5
 HOME_URL = http://samtools.sourceforge.net/
 DESCRIPTION = Utilities for manipulating alignments in the SAM format
 define BLURB
@@ -39,7 +40,7 @@
 
 BUILDDEPS =
 LIBDEPS = 
-
+# apt install  libbz2-1.0 libbz2-dev 
 ######################################################################
 
 include ../../../gar/gar.mk

=== modified file 'pkg/bio/samtools/sha256sums'
--- a/pkg/bio/samtools/sha256sums       2016-06-17 19:57:40 +0000
+++ b/pkg/bio/samtools/sha256sums       2017-09-23 04:22:17 +0000
@@ -1,1 +1,1 @@
-c24d26c303153d72b5bf3cc11f72c6c375a4ca1140cc485648c8c5473414b7f8  
download/samtools-1.1.tar.bz2
+8542da26832ee08c1978713f5f6188ff750635b50d8ab126a0c7bb2ac1ae2df6  
download/samtools-1.5.tar.bz2