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01/01: gnu: Add r-limma.
From: |
Roel Janssen |
Subject: |
01/01: gnu: Add r-limma. |
Date: |
Mon, 4 Jul 2016 12:40:56 +0000 (UTC) |
roelj pushed a commit to branch master
in repository guix.
commit 7d4224d7942868d3cdcf2438dcb5a2f9e46f2f07
Author: Roel Janssen <address@hidden>
Date: Mon Jul 4 14:39:16 2016 +0200
gnu: Add r-limma.
* gnu/packages/bioinformatics.scm (r-limma): New variable.
---
gnu/packages/bioinformatics.scm | 19 +++++++++++++++++++
1 file changed, 19 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index caab01d..05c3b7f 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4469,6 +4469,25 @@ names in their natural, rather than lexicographic,
order.")
coding changes and predict coding outcomes.")
(license license:artistic2.0)))
+(define-public r-limma
+ (package
+ (name "r-limma")
+ (version "3.28.14")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "limma" version))
+ (sha256
+ (base32
+ "1jgn66ajafhjlqpfcw2p85h6ah8mgmz66znmsw6pcapia7d34akw"))))
+ (build-system r-build-system)
+ (home-page "http://bioinf.wehi.edu.au/limma")
+ (synopsis "Package for linear models for microarray and RNA-seq data")
+ (description "This package can be used for the analysis of gene expression
+studies, especially the use of linear models for analysing designed experiments
+and the assessment of differential expression. The analysis methods apply to
+different technologies, including microarrays, RNA-seq, and quantitative PCR.")
+ (license license:gpl2+)))
+
(define-public r-xvector
(package
(name "r-xvector")