03/05: gnu: mash: Update to 2.0.

[Ben Woodcroft]

benwoodcroft pushed a commit to branch master
in repository guix.

commit f38ac742e6f542110cf838646a35c325201def51
Author: Ben Woodcroft <address@hidden>
Date:   Sun Mar 4 10:32:56 2018 +1000

    gnu: mash: Update to 2.0.
    
    * gnu/packages/bioinformatics.scm (mash): Update to 2.0.
---
 gnu/packages/bioinformatics.scm | 8 +++++---
 1 file changed, 5 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cf36b36..af515c0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3775,7 +3775,7 @@ sequences).")
 (define-public mash
   (package
     (name "mash")
-    (version "1.1.1")
+    (version "2.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -3784,7 +3784,7 @@ sequences).")
               (file-name (string-append name "-" version ".tar.gz"))
               (sha256
                (base32
-                "08znbvqq5xknfhmpp3wcj574zvi4p7i8zifi67c9qw9a6ikp42fj"))
+                "00fx14vpmgsijwxd1xql3if934l82v8ckqgjjyyhnr36qb9qrskv"))
               (modules '((guix build utils)))
               (snippet
                ;; Delete bundled kseq.
@@ -3802,7 +3802,9 @@ sequences).")
        (modify-phases %standard-phases
          (add-after 'unpack 'fix-includes
            (lambda _
-             (substitute* '("src/mash/Sketch.cpp" "src/mash/CommandFind.cpp")
+             (substitute* '("src/mash/Sketch.cpp"
+                            "src/mash/CommandFind.cpp"
+                            "src/mash/CommandScreen.cpp")
                (("^#include \"kseq\\.h\"")
                 "#include \"htslib/kseq.h\""))
              #t))