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70/112: gnu: r-mzr: Update to 2.14.0.
From: |
Ricardo Wurmus |
Subject: |
70/112: gnu: r-mzr: Update to 2.14.0. |
Date: |
Sat, 2 Jun 2018 07:40:17 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 39cc4917907c5f0376c30989970b857de49b8e77
Author: Ricardo Wurmus <address@hidden>
Date: Sat Jun 2 12:04:03 2018 +0200
gnu: r-mzr: Update to 2.14.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.14.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
---
gnu/packages/bioinformatics.scm | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 955decd..1ac5b7c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9395,14 +9395,14 @@ proteomics packages.")
(define-public r-mzr
(package
(name "r-mzr")
- (version "2.12.0")
+ (version "2.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "mzR" version))
(sha256
(base32
- "1x3gp30sfxz2v3k3swih9kff9b2rvk7hzhnlkp6ywlnn2wgb0q8c"))
+ "190m2bq5bqxhljaj4f7vz9wj5h5laaxd8zp5jampnql6xc4zmarg"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -9424,12 +9424,14 @@ proteomics packages.")
#t)))))
(inputs
`(("boost" ,boost) ; use this instead of the bundled boost sources
- ("netcdf" ,netcdf)))
+ ("netcdf" ,netcdf)
+ ("zlib" ,zlib)))
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-protgenerics" ,r-protgenerics)
("r-rcpp" ,r-rcpp)
+ ("r-rhdf5lib" ,r-rhdf5lib)
("r-zlibbioc" ,r-zlibbioc)))
(home-page "https://github.com/sneumann/mzR/")
(synopsis "Parser for mass spectrometry data files")
- 42/112: gnu: r-biocparallel: Update to 1.14.1., (continued)
- 42/112: gnu: r-biocparallel: Update to 1.14.1., Ricardo Wurmus, 2018/06/02
- 73/112: gnu: r-vsn: Update to 3.48.1., Ricardo Wurmus, 2018/06/02
- 53/112: gnu: r-impute: Update to 1.54.0., Ricardo Wurmus, 2018/06/02
- 54/112: gnu: r-seqpattern: Update to 1.12.0., Ricardo Wurmus, 2018/06/02
- 61/112: gnu: r-mutationalpatterns: Update to 1.6.1., Ricardo Wurmus, 2018/06/02
- 65/112: gnu: r-chipseq: Update to 1.30.0., Ricardo Wurmus, 2018/06/02
- 64/112: gnu: r-annotationfilter: Update to 1.4.0., Ricardo Wurmus, 2018/06/02
- 56/112: gnu: r-seqlogo: Update to 1.46.0., Ricardo Wurmus, 2018/06/02
- 71/112: gnu: r-affyio: Update to 1.50.0., Ricardo Wurmus, 2018/06/02
- 75/112: gnu: r-pcamethods: Update to 1.72.0., Ricardo Wurmus, 2018/06/02
- 70/112: gnu: r-mzr: Update to 2.14.0.,
Ricardo Wurmus <=
- 67/112: gnu: r-methylkit: Update to 1.6.0., Ricardo Wurmus, 2018/06/02
- 72/112: gnu: r-affy: Update to 1.58.0., Ricardo Wurmus, 2018/06/02
- 40/112: gnu: r-annotationdbi: Update to 1.42.1., Ricardo Wurmus, 2018/06/02
- 55/112: gnu: r-genomation: Update to 1.12.0., Ricardo Wurmus, 2018/06/02
- 60/112: gnu: r-bamsignals: Update to 1.12.0., Ricardo Wurmus, 2018/06/02
- 66/112: gnu: r-copywriter: Update to 2.12.0., Ricardo Wurmus, 2018/06/02
- 82/112: gnu: r-annotationhub: Update to 2.12.0., Ricardo Wurmus, 2018/06/02
- 43/112: gnu: r-biostrings: Update to 2.48.0., Ricardo Wurmus, 2018/06/02
- 47/112: gnu: r-genomicalignments: Update to 1.16.0., Ricardo Wurmus, 2018/06/02
- 51/112: gnu: r-topgo: Update to 2.32.0., Ricardo Wurmus, 2018/06/02