branch core-updates updated (ecd1301 -> 2817ac3)

[Marius Bakke]

mbakke pushed a change to branch core-updates
in repository guix.

      from  ecd1301   gnu: libinput: Update to 1.12.0.
      adds  6be4457   gnu: youtube-viewer: Don't use unstable tarball.
      adds  0b0b43e   gnu: youtube-viewer: Update to 3.4.1.
      adds  581b6f5   gnu: sudo: Update to 1.8.25p1.
      adds  7ec4f64   gnu: sg3_utils: Mark up description.
      adds  f0314f6   gnu: Add perl-devel-checklib.
      adds  b6afe7b   gnu: Add r-abnormality.
      adds  317b139   gnu: rust: Update to 1.27.2.
      adds  016cabf   gnu: Add r-abodoutlier.
      adds  03c95f0   gnu: Add r-abps.
      adds  6ffffb3   hydra: Remove useless 'parameterize'.
      adds  1dd153b   gnu: Add python-hic2cool.
      adds  daa6036   gnu: Add openblas-ilp64.
      adds  13512e1   git-download: 'git-predicate' returns #f on Git errors.
      adds  7a20877   gnu: python-llvmlite: Remove obsolete patch.
      adds  e830c9d   gnu: Rename "banana-pi" to "bananapi".
      adds  9e9e5d5   gnu: OpenSSL 1.1: Update to 1.1.1.
      adds  1d7cc68   gnu: coq: INVOKE.
      adds  ed017a7   gnu: coq: Update to 8.8.1.
      adds  56f3b85   gnu: python-iso8601: Update to 0.1.12.
      adds  c924fe3   gnu: umoci: Update to 0.4.2.
      adds  002d73a   gnu: libwps: Update to 0.4.10.
      adds  49c941b   gnu: libmwaw: Update to 0.3.14.
      adds  e1bf455   gnu: emacs-magit-popup: Update to 2.12.4.
      adds  f9fe94c   gnu: emacs-magit-popup: Don't use unstable tarball.
      adds  aae96f8   gnu: libetpan: Don't use unstable tarball.
      adds  9f1b186   gnu: libetpan: Update to 1.9.1.
      adds  bbe2a94   gnu: libsigrokdecode: Update to 0.5.2.
      adds  25bc637   gnu: snakemake: Update to 5.2.4.
      adds  61853b7   gnu: libjpeg: Improve description.
      adds  5c34d97   gnu: pybind11: Don't use unstable tarball.
      adds  3319817   gnu: pybind11: Update to 2.2.4.
      adds  483be9b   gnu: ocaml-ounit: Update to 2.0.8.
      adds  81fb037   gnu: libetpan: Use HTTPS home page.
      adds  021b42f   gnu: zsh: Update to 5.6.2.
      adds  935d5ce   gnu: Add python-pycountry.
      adds  2ee6778   gnu: Add python-ua-parser.
      adds  511f3be   gnu: Add python-user-agents.
      adds  4e9832d   gnu: gambit-c: Update home page.
      adds  4be83af   gnu: gambit-c: Update to 4.9.0.
      adds  85a3497   gnu: wine: Update to 3.0.3.
      adds  b947c61   gnu: wine-staging-patchset-data: Update to 3.16.
      adds  e8079dd   gnu: wine-staging: Update to 3.16.
      adds  6365792   gnu: php: Update to 7.2.10.
      adds  cbb1b16   admin: python-pyudev: Add dependency on python-six.
      adds  2db0f9c   gnu: Add ruby-yajl-ruby.
      adds  ed4b6b1   gnu: Add ruby-oj.
      adds  1b6f547   gnu: Enable tests for ruby-multi-json.
      adds  5edef88   gnu: Add ruby-multi-test.
      adds  ebbfc59   graph: Add '--system'.
      adds  3c0e163   channels: Add Guile-Git as a dependency of external 
channels.
      adds  b9e1fdd   gnupg: Use 'gpgv' and keybox files; adjust 'guix refresh' 
accordingly.
      adds  31fdfc0   gnu: dmidecode: Update to 3.2.
      adds  b55d75f   gnu: address@hidden: Update to 4.4.156.
      adds  bf9d141   gnu: address@hidden: Update to 4.9.127.
      adds  c333c8b   gnu: address@hidden: Update to 4.14.70.
      adds  ad99df3   gnu: linux-libre: Update to 4.18.8.
      adds  4fed15f   gnu: mbedtls-apache: Update to 2.7.6.
      adds  956bcc8   gnu: python-dirsync: Update to 2.2.3.
      adds  36aff81   gnu: powwow: Use HTTPS home page.
      adds  99d386a   gnu: powwow: Update to 1.2.18.
      adds  a09a211   gnu: libiptcdata: Mark up description.
      adds  f6a4d57   gnu: foo2zjs: Update to 20180910.
      adds  ee12754   gnu: efl: Update to 1.21.1.
      adds  d68aa41   gnu: enlightenment: Update to 0.22.4.
      adds  3809824   store: Add missing buffer flushes.
      adds  e83b2b0   git: Choose a saner default for 
'%repository-cache-directory'.
      adds  56c240b   gnu: Add confusion-mdl.
      adds  0edc232   gnu: gourmet: Use INVOKE.
      adds  b22c44f   gnu: cinnamon-desktop: Use Guix's built-in bootstrap 
phase.
      adds  8ecd843   gnu: exfat-utils: Update to 1.3.0.
      adds  7c0ed27   gnu: ncmpc: Update to 0.30.
      adds  487cf5a   gnu: rc: Simplify.
      adds  4999f45   gnu: libburn: Update to 1.5.0.
      adds  8190578   gnu: libisofs: Update to 1.5.0.
      adds  d990517   gnu: xorriso: Update to 1.5.0.
      adds  56c1807   gnu: busybox: Update to 1.29.3.
      adds  32b3611   gnu: Go 1.10: Update to 1.10.4.
      adds  000bbe0   store: Add another missing buffer flush.
      adds  cda08dd   tests: Skip 'self-contained-tarball' test unconditionally.
      adds  912adda   describe: Work correctly on generation-less profiles.
      adds  0058888   gnu: Add guile-debbugs.
      adds  1d2b542   pull: Assume 'set-tls-certificate-locations!' is 
available.
      adds  20f8d73   pull: Use /etc/ssl/certs by default if it exists and is 
non-empty.
      adds  1cfcb84   gnu: git-credential-netrc: Add Git.pm to PERL5LIB.
      adds  4a90fcf   gnu: mrustc: Enable tests.
      adds  6c1a658   gnu: address@hidden: Install libtest.
      adds  c5c1e41   gnu: Reinstate xf86-video-ast.
      adds  622ef2b   gnu: arpack-ng: Don't use unstable tarball.
      adds  f03c4ec   gnu: arpack-ng: Update to 3.6.3.
      adds  f6ae59c   gnu: feh: Update to 2.28.
      adds  4d67925   gnu: glm: Update to 0.9.9.2.
      adds  7fd3082   services: udev: Simplify 'start' method.
      adds  241358d   services: networking: Remove unbound variable reference 
in 'stop'.
      adds  7b6b7cd   build-system/asdf: Handle all asdf dependency 
specifications.
      adds  29a3ffb   build-system/asdf: Log lisp system invocations.
      adds  e831a16   build-system/asdf: Use invoke.
      adds  5f6908d   build-system/asdf: Adopt asdf conventions.
      adds  1d98b44   gnu: sbcl-slynk: Fix the build.
      adds  508d5c5   gnu: OpenSC: Update to 0.19.0 [security fixes].
      adds  e266043   gnu: shotwell: Update to 0.28.4.
      adds  29a000b   gnu: sg3-utils: Update to 1.44.
      adds  e564d33   gnu: gourmet: Use HTTPS home page.
      adds  7616d75   Use INVOKE in (gnu packages telephony).
      adds  4f66ae2   gnu: ruby-heredoc-unindent: Fix typo in description.
      adds  9923d5a   gnu: Use INVOKE & return #t from Ruby package phases.
      adds  2385ecb   Use INVOKE in (gnu packages shells).
      adds  e61c299   Use INVOKE in (gnu packages xdisorg).
      adds  4eb1619   gnu: opusfile: Update to 0.11.
      adds  84c7fbf   gnu: ccid: Update to 1.4.30.
      adds  3e63a83   gnu: u-boot: Use HTTPS home page.
      adds  9926b8f   gnu: services: Add iptables service.
      adds  166b2c9   gnu: eolie: Update home page.
      adds  3e12df7   gnu: Add emacs-dired-sidebar.
       new  2817ac3   Merge branch 'master' into core-updates

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 build-aux/hydra/gnu-system.scm                     |  11 +-
 doc/guix.texi                                      |  85 +++++++++
 gnu/bootloader/u-boot.scm                          |   6 +-
 gnu/local.mk                                       |   3 +-
 gnu/packages/admin.scm                             |  10 +-
 gnu/packages/bioinformatics.scm                    |  24 +++
 gnu/packages/bootloaders.scm                       |   4 +-
 gnu/packages/busybox.scm                           |   4 +-
 gnu/packages/cdrom.scm                             |  12 +-
 gnu/packages/cinnamon.scm                          |  10 +-
 gnu/packages/cran.scm                              |  78 ++++++++
 gnu/packages/cups.scm                              |   4 +-
 gnu/packages/electronics.scm                       |   4 +-
 gnu/packages/emacs.scm                             |  36 +++-
 gnu/packages/enlightenment.scm                     |   8 +-
 gnu/packages/games.scm                             |   6 +-
 gnu/packages/gnome.scm                             |   6 +-
 gnu/packages/golang.scm                            |   4 +-
 gnu/packages/guile.scm                             |  27 +++
 gnu/packages/image-viewers.scm                     |   4 +-
 gnu/packages/image.scm                             |  17 +-
 gnu/packages/libreoffice.scm                       |  16 +-
 gnu/packages/linux.scm                             |  16 +-
 gnu/packages/lisp.scm                              | 114 ++++++++++--
 gnu/packages/llvm.scm                              |  10 +-
 gnu/packages/mail.scm                              |  15 +-
 gnu/packages/maths.scm                             |  37 ++--
 gnu/packages/mpd.scm                               |  20 +-
 gnu/packages/mtools.scm                            |   4 +-
 gnu/packages/nutrition.scm                         |   7 +-
 gnu/packages/ocaml.scm                             |  33 ++--
 ...hash-in.patch => openssl-1.1-c-rehash-in.patch} |   6 +-
 .../patches/xf86-video-ast-remove-mibstore.patch   |  90 ---------
 gnu/packages/perl.scm                              |  24 +++
 gnu/packages/php.scm                               |   5 +-
 gnu/packages/python.scm                            | 111 ++++++++++--
 gnu/packages/rails.scm                             |  14 +-
 gnu/packages/ruby.scm                              | 201 ++++++++++++++++-----
 gnu/packages/rust.scm                              |  17 +-
 gnu/packages/scheme.scm                            |  19 +-
 gnu/packages/scsi.scm                              |  31 ++--
 gnu/packages/security-token.scm                    |  10 +-
 gnu/packages/shells.scm                            |  24 +--
 gnu/packages/telephony.scm                         |  46 ++---
 gnu/packages/time.scm                              |   4 +-
 gnu/packages/tls.scm                               |  34 +++-
 gnu/packages/version-control.scm                   |   7 +
 gnu/packages/video.scm                             |  14 +-
 gnu/packages/virtualization.scm                    |   4 +-
 gnu/packages/wine.scm                              |  10 +-
 gnu/packages/xdisorg.scm                           |  16 +-
 gnu/packages/xiph.scm                              |   4 +-
 gnu/packages/xorg.scm                              |  48 +++--
 gnu/services/base.scm                              |  45 ++---
 gnu/services/networking.scm                        |  56 +++++-
 gnu/system/install.scm                             |   6 +-
 gnu/tests/networking.scm                           | 129 ++++++++++++-
 guix/build/lisp-utils.scm                          |  63 ++++---
 guix/channels.scm                                  |  16 +-
 guix/git-download.scm                              |  36 ++--
 guix/git.scm                                       |   3 +-
 guix/gnupg.scm                                     |  58 ++++--
 guix/scripts/describe.scm                          |   6 +-
 guix/scripts/graph.scm                             |  12 +-
 guix/scripts/pull.scm                              |  35 ++--
 guix/scripts/refresh.scm                           |  13 +-
 guix/store.scm                                     |   3 +
 tests/pack.scm                                     |   7 +-
 68 files changed, 1302 insertions(+), 560 deletions(-)
 rename gnu/packages/patches/{openssl-1.1.0-c-rehash-in.patch => 
openssl-1.1-c-rehash-in.patch} (80%)
 delete mode 100644 gnu/packages/patches/xf86-video-ast-remove-mibstore.patch