02/03: gnu: r-annotate: Move to bioconductor.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 7097c7009deae1a1b4997e5222fd72b0c6c330f4
Author: Ricardo Wurmus <address@hidden>
Date:   Sun Jan 13 12:55:46 2019 +0100

    gnu: r-annotate: Move to bioconductor.
    
    * gnu/packages/bioinformatics.scm (r-annotate): Move from here...
    * gnu/packages/bioconductor.scm (r-annotate): ...to here.
---
 gnu/packages/bioconductor.scm   | 29 ++++++++++++++++++++++++++++-
 gnu/packages/bioinformatics.scm | 27 ---------------------------
 2 files changed, 28 insertions(+), 28 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 37ac941..22d8b53 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1,6 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2018, 2019 Ricardo Wurmus <address@hidden>
-;;; Copyright © 2018 Roel Janssen <address@hidden>
+;;; Copyright © 2017, 2018 Roel Janssen <address@hidden>
 ;;; Copyright © 2018 Tobias Geerinckx-Rice <address@hidden>
 ;;;
 ;;; This file is part of GNU Guix.
@@ -228,6 +228,33 @@ database is exposed as a @code{TxDb} object.")
     (license license:artistic2.0)))
 
 
+(define-public r-annotate
+  (package
+    (name "r-annotate")
+    (version "1.60.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "annotate" version))
+       (sha256
+        (base32
+         "0p6c96lay23a67dyirgnwzm2yw22m592z780vy6p4nqwla8ha18n"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-annotationdbi" ,r-annotationdbi)
+       ("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-dbi" ,r-dbi)
+       ("r-rcurl" ,r-rcurl)
+       ("r-xml" ,r-xml)
+       ("r-xtable" ,r-xtable)))
+    (home-page
+     "https://bioconductor.org/packages/annotate";)
+    (synopsis "Annotation for microarrays")
+    (description "This package provides R environments for the annotation of
+microarrays.")
+    (license license:artistic2.0)))
+
 (define-public r-hpar
   (package
     (name "r-hpar")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 66785d0..4012b47 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6338,33 +6338,6 @@ between two different types of motif instances using as 
much relevant
 information as possible.")
     (license (list license:gpl2+ license:gpl3+))))
 
-(define-public r-annotate
-  (package
-    (name "r-annotate")
-    (version "1.60.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "annotate" version))
-       (sha256
-        (base32
-         "0p6c96lay23a67dyirgnwzm2yw22m592z780vy6p4nqwla8ha18n"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-annotationdbi" ,r-annotationdbi)
-       ("r-biobase" ,r-biobase)
-       ("r-biocgenerics" ,r-biocgenerics)
-       ("r-dbi" ,r-dbi)
-       ("r-rcurl" ,r-rcurl)
-       ("r-xml" ,r-xml)
-       ("r-xtable" ,r-xtable)))
-    (home-page
-     "https://bioconductor.org/packages/annotate";)
-    (synopsis "Annotation for microarrays")
-    (description "This package provides R environments for the annotation of
-microarrays.")
-    (license license:artistic2.0)))
-
 (define-public r-copynumber
   (package
     (name "r-copynumber")