03/23: gnu: r-qvalue: Move to (gnu packages bioconductor).

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 4dc2ecc27933a1c1f41f04ca9f3b6940f592f49b
Author: Ricardo Wurmus <address@hidden>
Date:   Tue Mar 12 22:06:05 2019 +0100

    gnu: r-qvalue: Move to (gnu packages bioconductor).
    
    * gnu/packages/bioinformatics.scm (r-qvalue): Move from here...
    * gnu/packages/bioconductor.scm (r-qvalue): ...to here.
---
 gnu/packages/bioconductor.scm   | 29 +++++++++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 29 -----------------------------
 2 files changed, 29 insertions(+), 29 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 329bacb..44b81b0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -807,6 +807,35 @@ region sets and other genomic features.")
      "This package provides functions for plotting genomic data.")
     (license license:artistic2.0)))
 
+(define-public r-qvalue
+  (package
+    (name "r-qvalue")
+    (version "2.14.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "qvalue" version))
+       (sha256
+        (base32
+         "0kxavzm1j2mk26qicmjm90nxx4w5h3dxighzks7wzihay3k8cysc"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-ggplot2" ,r-ggplot2)
+       ("r-reshape2" ,r-reshape2)))
+    (home-page "http://github.com/jdstorey/qvalue";)
+    (synopsis "Q-value estimation for false discovery rate control")
+    (description
+     "This package takes a list of p-values resulting from the simultaneous
+testing of many hypotheses and estimates their q-values and local @dfn{false
+discovery rate} (FDR) values.  The q-value of a test measures the proportion
+of false positives incurred when that particular test is called significant.
+The local FDR measures the posterior probability the null hypothesis is true
+given the test's p-value.  Various plots are automatically generated, allowing
+one to make sensible significance cut-offs.  The software can be applied to
+problems in genomics, brain imaging, astrophysics, and data mining.")
+    ;; Any version of the LGPL.
+    (license license:lgpl3+)))
+
 (define-public r-diffbind
   (package
     (name "r-diffbind")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 26fcc3a..e29f2a7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10293,35 +10293,6 @@ quality controls, normalization, visualization, and 
further analysis are also
 provided.")
     (license license:artistic2.0)))
 
-(define-public r-qvalue
-  (package
-    (name "r-qvalue")
-    (version "2.14.1")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "qvalue" version))
-       (sha256
-        (base32
-         "0kxavzm1j2mk26qicmjm90nxx4w5h3dxighzks7wzihay3k8cysc"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-ggplot2" ,r-ggplot2)
-       ("r-reshape2" ,r-reshape2)))
-    (home-page "http://github.com/jdstorey/qvalue";)
-    (synopsis "Q-value estimation for false discovery rate control")
-    (description
-     "This package takes a list of p-values resulting from the simultaneous
-testing of many hypotheses and estimates their q-values and local @dfn{false
-discovery rate} (FDR) values.  The q-value of a test measures the proportion
-of false positives incurred when that particular test is called significant.
-The local FDR measures the posterior probability the null hypothesis is true
-given the test's p-value.  Various plots are automatically generated, allowing
-one to make sensible significance cut-offs.  The software can be applied to
-problems in genomics, brain imaging, astrophysics, and data mining.")
-    ;; Any version of the LGPL.
-    (license license:lgpl3+)))
-
 (define-public r-hdf5array
   (package
     (name "r-hdf5array")