04/06: gnu: r-wgcna: Move to (gnu packages cran).

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit c5a2b518ad1cf5e062c073fe31692e690c28ab78
Author: Ricardo Wurmus <address@hidden>
Date:   Mon Mar 25 14:05:09 2019 +0100

    gnu: r-wgcna: Move to (gnu packages cran).
    
    * gnu/packages/bioinformatics.scm (r-wgcna): Move from here...
    * gnu/packages/cran.scm (r-wgcna): ...to here.
---
 gnu/packages/bioinformatics.scm | 39 ---------------------------------------
 gnu/packages/cran.scm           | 39 +++++++++++++++++++++++++++++++++++++++
 2 files changed, 39 insertions(+), 39 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c1d7f5d..1a942b6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8466,45 +8466,6 @@ characterization and visualization of a wide range of 
mutational patterns
 in SNV base substitution data.")
     (license license:expat)))
 
-(define-public r-wgcna
-  (package
-    (name "r-wgcna")
-    (version "1.66")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "WGCNA" version))
-       (sha256
-        (base32
-         "0rhnyhzfn93yp24jz9v6dzrmyizwzdw070a7idm0k33w1cm8sjqv"))))
-    (properties `((upstream-name . "WGCNA")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-annotationdbi" ,r-annotationdbi)
-       ("r-doparallel" ,r-doparallel)
-       ("r-dynamictreecut" ,r-dynamictreecut)
-       ("r-fastcluster" ,r-fastcluster)
-       ("r-foreach" ,r-foreach)
-       ("r-go-db" ,r-go-db)
-       ("r-hmisc" ,r-hmisc)
-       ("r-impute" ,r-impute)
-       ("r-rcpp" ,r-rcpp)
-       ("r-robust" ,r-robust)
-       ("r-survival" ,r-survival)
-       ("r-matrixstats" ,r-matrixstats)
-       ("r-preprocesscore" ,r-preprocesscore)))
-    (home-page
-     
"http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/";)
-    (synopsis "Weighted correlation network analysis")
-    (description
-     "This package provides functions necessary to perform Weighted
-Correlation Network Analysis on high-dimensional data.  It includes functions
-for rudimentary data cleaning, construction and summarization of correlation
-networks, module identification and functions for relating both variables and
-modules to sample traits.  It also includes a number of utility functions for
-data manipulation and visualization.")
-    (license license:gpl2+)))
-
 (define-public r-chipkernels
   (let ((commit "c9cfcacb626b1221094fb3490ea7bac0fd625372")
         (revision "1"))
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 8bf5404..ba86457 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -12715,3 +12715,42 @@ authoring books and technical documents with R 
Markdown.")
 @code{optparse} library to be used with Rscript to write shebang scripts
 that accept short and long options.")
     (license license:gpl2+)))
+
+(define-public r-wgcna
+  (package
+    (name "r-wgcna")
+    (version "1.66")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "WGCNA" version))
+       (sha256
+        (base32
+         "0rhnyhzfn93yp24jz9v6dzrmyizwzdw070a7idm0k33w1cm8sjqv"))))
+    (properties `((upstream-name . "WGCNA")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-annotationdbi" ,r-annotationdbi)
+       ("r-doparallel" ,r-doparallel)
+       ("r-dynamictreecut" ,r-dynamictreecut)
+       ("r-fastcluster" ,r-fastcluster)
+       ("r-foreach" ,r-foreach)
+       ("r-go-db" ,r-go-db)
+       ("r-hmisc" ,r-hmisc)
+       ("r-impute" ,r-impute)
+       ("r-rcpp" ,r-rcpp)
+       ("r-robust" ,r-robust)
+       ("r-survival" ,r-survival)
+       ("r-matrixstats" ,r-matrixstats)
+       ("r-preprocesscore" ,r-preprocesscore)))
+    (home-page
+     
"http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/Rpackages/WGCNA/";)
+    (synopsis "Weighted correlation network analysis")
+    (description
+     "This package provides functions necessary to perform Weighted
+Correlation Network Analysis on high-dimensional data.  It includes functions
+for rudimentary data cleaning, construction and summarization of correlation
+networks, module identification and functions for relating both variables and
+modules to sample traits.  It also includes a number of utility functions for
+data manipulation and visualization.")
+    (license license:gpl2+)))