|Subject:||[bug#32984] [PATCH] gnu: filtlong: update path in aux script.|
|Date:||Mon, 5 Nov 2018 17:26:12 +0100|
|User-agent:||Mozilla/5.0 (X11; Linux x86_64; rv:60.0) Gecko/20100101 Thunderbird/60.2.1|
I am sorry for this delayed response!
In the initial version of this description, I have put the auxiliary scripts in /scripts/.
I didn't know that all auxiliary scripts should be put in /share/name_of_package/scripts.The script loads the package using a relative path.
Ludo corrected my description and changed my substitute lines to this,
Now the script is on the right place (/share/filtlong/scripts/histogram.py), but it does not contain the right relative path. So, this patch is needed to correct the relative path.Sorry, from the beginning was my mistake!
On 11.10.2018 22:55, Leo Famulari wrote:
On Tue, Oct 09, 2018 at 06:22:39PM +0200, pimi wrote:* gnu/packages/bioinformatics.scm (filtlong)[extra scritps]: corrected the loading path for the filtlong in the script read_info_histograms.sh.[...](lambda _ (substitute* "scripts/read_info_histograms.sh" (("awk") (which "gawk"))) + (substitute* "scripts/read_info_histograms.sh" + (("/../") "/../../../")) #t)))))Can you add a code comment explaining the effect of this change? It's rather cryptic! :)
-- All the best! Mădălin Ionel Patrașcu System Administrator The Berlin Institute for Medical Systems Biology (BIMSB) Max Delbrück Center (MDC) Robert-Rössle-Straße 10 House 87, room 1.10 13125 Berlin, Germany
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