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Problem in 3.6.2 on SL6 with hdf5


From: Michael Martins
Subject: Problem in 3.6.2 on SL6 with hdf5
Date: Thu, 26 Jul 2012 12:37:52 +0200
User-agent: Mozilla/5.0 (X11; Linux x86_64; rv:13.0) Gecko/20120614 Thunderbird/13.0.1

Dear all

I have a problem linking 3.6.2 on Scientific Linux 6 (SLD6, 64 bit) with the hdf5 library. configure finds all libaries including hdf5 and compling is now problem. However in the linking process I am getting the following errors

./.libs/liboctinterp.so: undefined reference to `H5Eset_auto2'
./.libs/liboctinterp.so: undefined reference to `H5Gcreate2'
./.libs/liboctinterp.so: undefined reference to `H5Dopen2'
./.libs/liboctinterp.so: undefined reference to `H5Gopen2'
./.libs/liboctinterp.so: undefined reference to `H5Dcreate2'
./.libs/liboctinterp.so: undefined reference to `H5Eget_auto2'
./.libs/liboctinterp.so: undefined reference to `H5Acreate2'

This is somehow strange, because H5Eset_auto2 is not found in any part of the octave sources. Only H5Eset_auto exists, e.g. in
src/ls-hdf5.cc:  H5Eset_auto (H5E_DEFAULT, 0, 0);

Can anybody help here?

All the best
Michael


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