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[igraph] Memory usage


From: Russell Neches
Subject: [igraph] Memory usage
Date: Thu, 11 Nov 2010 01:21:22 -0800

Greetings!

I have been benchmarking igraph to see if it might be possible to use it
for building de Bruijn graphs for genome sequence assembly. I've hacked
together a very simple implementation using the python bindings, and to
my dismay, I seem to be getting memory usage of more than 6KB per
vertex! 

        edges    : 791198
        vertices : 791954
        memory   : 5029084 kb

Is this typical?

Russell

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