Last login: Fri Nov 4 11:30:12 on ttys000 Bedarthas-MacBook-Air:~ bedartha$ python Python 2.6.6 (r266:84374, Aug 31 2010, 11:00:51) [GCC 4.0.1 (Apple Inc. build 5493)] on darwin Type "help", "copyright", "credits" or "license" for more information. >>> Bedarthas-MacBook-Air:~ bedartha$ gcc -version i686-apple-darwin11-llvm-gcc-4.2: no input files Bedarthas-MacBook-Air:~ bedartha$ export CC=llvm-gcc-4.2 Bedarthas-MacBook-Air:~ bedartha$ export CXX=llvm-g++-4.2 Bedarthas-MacBook-Air:~ bedartha$ export FFLAGS=-ff2c Bedarthas-MacBook-Air:~ bedartha$ cd pythontools/igraph-0.5.4/ Bedarthas-MacBook-Air:igraph-0.5.4 bedartha$ ./configure checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking for gcc... llvm-gcc-4.2 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether llvm-gcc-4.2 accepts -g... yes checking for llvm-gcc-4.2 option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of llvm-gcc-4.2... gcc3 checking whether we are using the GNU C++ compiler... yes checking whether llvm-g++-4.2 accepts -g... yes checking dependency style of llvm-g++-4.2... gcc3 checking how to run the C++ preprocessor... llvm-g++-4.2 -E checking for flex... flex checking lex output file root... lex.yy checking lex library... -lfl checking whether yytext is a pointer... yes checking for bison... bison -y checking how to run the C preprocessor... llvm-gcc-4.2 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking sys/times.h usability... yes checking sys/times.h presence... yes checking for sys/times.h... yes checking build system type... i386-apple-darwin11.0.1 checking host system type... i386-apple-darwin11.0.1 checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by llvm-gcc-4.2... /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld checking if the linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from llvm-gcc-4.2 object... ok checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for dlfcn.h... yes checking whether we are using the GNU C++ compiler... (cached) yes checking whether llvm-g++-4.2 accepts -g... (cached) yes checking dependency style of llvm-g++-4.2... (cached) gcc3 checking how to run the C++ preprocessor... llvm-g++-4.2 -E checking for objdir... .libs checking if llvm-gcc-4.2 supports -fno-rtti -fno-exceptions... no checking for llvm-gcc-4.2 option to produce PIC... -fno-common -DPIC checking if llvm-gcc-4.2 PIC flag -fno-common -DPIC works... yes checking if llvm-gcc-4.2 static flag -static works... no checking if llvm-gcc-4.2 supports -c -o file.o... yes checking if llvm-gcc-4.2 supports -c -o file.o... (cached) yes checking whether the llvm-gcc-4.2 linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin11.0.1 dyld checking how to hardcode library paths into programs... immediate checking for dlopen in -ldl... yes checking whether a program can dlopen itself... yes checking whether a statically linked program can dlopen itself... yes checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ld used by llvm-g++-4.2... /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld checking if the linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) is GNU ld... no checking whether the llvm-g++-4.2 linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes checking for llvm-g++-4.2 option to produce PIC... -fno-common -DPIC checking if llvm-g++-4.2 PIC flag -fno-common -DPIC works... yes checking if llvm-g++-4.2 static flag -static works... no checking if llvm-g++-4.2 supports -c -o file.o... yes checking if llvm-g++-4.2 supports -c -o file.o... (cached) yes checking whether the llvm-g++-4.2 linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin11.0.1 dyld checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking for expm1... yes checking for rint... yes checking for rintf... yes checking for finite... yes checking for log2... yes checking for logbl... yes checking for snprintf... yes checking for log1p... yes checking for round... yes checking for fmin... yes checking for strcasecmp... yes checking for isnan... yes checking whether compiler supports -ffloat-store... yes checking whether compiler supports -fstore... no checking for xml2-config... /usr/bin/xml2-config checking for xmlSAXUserParseFile in -lxml2... yes checking libxml/parser.h usability... yes checking libxml/parser.h presence... yes checking for libxml/parser.h... yes checking for __gmpz_add in -lgmp... no configure: creating ./config.status config.status: creating tests/Makefile config.status: creating tests/atlocal config.status: creating Makefile config.status: creating src/Makefile config.status: creating igraph.pc config.status: creating igraph_Info.plist config.status: creating doc/Makefile config.status: creating doc/book/Makefile config.status: creating interfaces/R/configure.in config.status: creating interfaces/R/Makefile config.status: creating interfaces/R/src/Makevars.win config.status: creating interfaces/R/DESCRIPTION config.status: creating interfaces/Makefile config.status: creating interfaces/shell/Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing tests/atconfig commands config.status: executing depfiles commands config.status: executing libtool commands igraph successfully configured. GraphML format support -- yes GMP library support -- no Use internal ARPACK -- yes Use internal LAPACK -- yes Use internal BLAS -- yes Debug build -- no Profiling -- no Shell interface -- no Bedarthas-MacBook-Air:igraph-0.5.4 bedartha$ make make all-recursive Making all in src make all-am make[3]: Nothing to be done for `all-am'. Making all in tests make[2]: Nothing to be done for `all'. Making all in interfaces make[3]: Nothing to be done for `all-am'. Bedarthas-MacBook-Air:igraph-0.5.4 bedartha$ make install Making install in src make install-am test -z "/usr/local/lib" || .././install-sh -c -d "/usr/local/lib" /bin/sh ../libtool --mode=install /usr/bin/install -c libigraph.la '/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libigraph.0.dylib /usr/local/lib/libigraph.0.dylib libtool: install: (cd /usr/local/lib && { ln -s -f libigraph.0.dylib libigraph.dylib || { rm -f libigraph.dylib && ln -s libigraph.0.dylib libigraph.dylib; }; }) libtool: install: /usr/bin/install -c .libs/libigraph.lai /usr/local/lib/libigraph.la libtool: install: /usr/bin/install -c .libs/libigraph.a /usr/local/lib/libigraph.a libtool: install: chmod 644 /usr/local/lib/libigraph.a libtool: install: ranlib /usr/local/lib/libigraph.a ---------------------------------------------------------------------- Libraries have been installed in: /usr/local/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `DYLD_LIBRARY_PATH' environment variable during execution See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- test -z "/usr/local/include/igraph" || .././install-sh -c -d "/usr/local/include/igraph" /usr/bin/install -c -m 644 igraph.h types.h attributes.h error.h interrupt.h NetDataTypes.h NetRoutines.h pottsmodel_2.h igraph_pmt.h igraph_pmt_off.h vector.h gml_tree.h vector.pmt walktrap_graph.h walktrap_communities.h walktrap_heap.h matrix.h matrix.pmt stack.h stack.pmt dqueue.pmt dqueue.h heap.pmt heap.h arpack.h array.pmt array.h arpack_internal.h f2c.h drl_layout.h drl_parse.h drl_graph.h DensityGrid.h drl_Node.h gengraph_box_list.h gengraph_header.h gengraph_definitions.h gengraph_powerlaw.h gengraph_degree_sequence.h gengraph_qsort.h '/usr/local/include/igraph' install: /usr/local/include/igraph/igraph.h: Permission denied make[3]: *** [install-includeHEADERS] Error 71 make[2]: *** [install-am] Error 2 make[1]: *** [install] Error 2 make: *** [install-recursive] Error 1 Bedarthas-MacBook-Air:igraph-0.5.4 bedartha$ sudo make install Password: Making install in src make install-am test -z "/usr/local/lib" || .././install-sh -c -d "/usr/local/lib" /bin/sh ../libtool --mode=install /usr/bin/install -c libigraph.la '/usr/local/lib' libtool: install: /usr/bin/install -c .libs/libigraph.0.dylib /usr/local/lib/libigraph.0.dylib libtool: install: (cd /usr/local/lib && { ln -s -f libigraph.0.dylib libigraph.dylib || { rm -f libigraph.dylib && ln -s libigraph.0.dylib libigraph.dylib; }; }) libtool: install: /usr/bin/install -c .libs/libigraph.lai /usr/local/lib/libigraph.la libtool: install: /usr/bin/install -c .libs/libigraph.a /usr/local/lib/libigraph.a libtool: install: chmod 644 /usr/local/lib/libigraph.a libtool: install: ranlib /usr/local/lib/libigraph.a ---------------------------------------------------------------------- Libraries have been installed in: /usr/local/lib If you ever happen to want to link against installed libraries in a given directory, LIBDIR, you must either use libtool, and specify the full pathname of the library, or use the `-LLIBDIR' flag during linking and do at least one of the following: - add LIBDIR to the `DYLD_LIBRARY_PATH' environment variable during execution See any operating system documentation about shared libraries for more information, such as the ld(1) and ld.so(8) manual pages. ---------------------------------------------------------------------- test -z "/usr/local/include/igraph" || .././install-sh -c -d "/usr/local/include/igraph" /usr/bin/install -c -m 644 igraph.h types.h attributes.h error.h interrupt.h NetDataTypes.h NetRoutines.h pottsmodel_2.h igraph_pmt.h igraph_pmt_off.h vector.h gml_tree.h vector.pmt walktrap_graph.h walktrap_communities.h walktrap_heap.h matrix.h matrix.pmt stack.h stack.pmt dqueue.pmt dqueue.h heap.pmt heap.h arpack.h array.pmt array.h arpack_internal.h f2c.h drl_layout.h drl_parse.h drl_graph.h DensityGrid.h drl_Node.h gengraph_box_list.h gengraph_header.h gengraph_definitions.h gengraph_powerlaw.h gengraph_degree_sequence.h gengraph_qsort.h '/usr/local/include/igraph' /usr/bin/install -c -m 644 gengraph_graph_molloy_hash.h gengraph_random.h gengraph_graph_molloy_optimized.h gengraph_vertex_cover.h gengraph_hash.h igraph_math.h drl_graph_3d.h drl_layout_3d.h drl_Node_3d.h DensityGrid_3d.h '/usr/local/include/igraph' Making install in tests make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. Making install in interfaces make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. make install-exec-hook if test -f ./src/.libs/cygigraph-0.dll ; \ then cp ./src/.libs/cygigraph-0.dll \ /usr/local/lib ; fi test -z "/usr/local/lib/pkgconfig" || ./install-sh -c -d "/usr/local/lib/pkgconfig" /usr/bin/install -c -m 644 igraph.pc '/usr/local/lib/pkgconfig' Bedarthas-MacBook-Air:igraph-0.5.4 bedartha$ cd ../python-igraph-0.5.4 Bedarthas-MacBook-Air:python-igraph-0.5.4 bedartha$ python2.6 setup.py build Include path: /usr/local/include Library path: /usr/local/lib running build running build_py running build_ext building 'igraph.core' extension llvm-gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -arch ppc -arch i386 -g -O2 -DNDEBUG -g -O3 -I/usr/local/include -I/usr/local/include -I/usr/include -I/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c src/arpackobject.c -o build/temp.macosx-10.3-fat-2.6/src/arpackobject.o llvm-gcc-4.2: error trying to exec '/usr/bin/../llvm-gcc-4.2/bin/powerpc-apple-darwin11-llvm-gcc-4.2': execvp: No such file or directory In file included from /usr/include/architecture/i386/math.h:630, from /usr/include/math.h:28, from /Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/pyport.h:235, from /Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/Python.h:58, from src/arpackobject.h:27, from src/arpackobject.c:24: /usr/include/AvailabilityMacros.h:109:14: warning: #warning Building for Intel with Mac OS X Deployment Target < 10.4 is invalid. lipo: can't figure out the architecture type of: /var/folders/6b/xjy71xzd1vb8wr139ryyvjy00000gn/T//ccMbChaN.out error: command 'llvm-gcc-4.2' failed with exit status 255 Bedarthas-MacBook-Air:python-igraph-0.5.4 bedartha$