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Re: Octave findpeaks called from cellfun gives an error


From: Andrew Knyazev
Subject: Re: Octave findpeaks called from cellfun gives an error
Date: Wed, 29 Jan 2014 13:58:02 -0500
User-agent: Mozilla/5.0 (Windows NT 6.1; WOW64; rv:24.0) Gecko/20100101 Thunderbird/24.2.0

Juan, thank you for your prompt reply! I apologize for reporting this by email. I have tried to report it using the bug tracker, but I do not have my login credentials here with me.

The loop below gives the same error. The issue I guess is that cellfun requires the data to be cell, which is apparently not supported by findpeaks. Of course, one can just run the loop with numeric values in findpeaks, avoiding the problem altogether. This is why I report this as an improvement, not as a bug.

I am guessing that findpeaks is not the only function having this issue in Octave...

Thanks, Andrew

On 1/29/2014 1:21 PM, Juan Pablo Carbajal wrote:
Andrew, please use the bug tracker to report the bug (also keep the
community posted). It will get lost in my inbox.

Could you please check the following loop code, I suspect that the
error has nothing to do with cellfun
C =  num2cell(abs(dCd),1);
H = num2cell(mPH,1);
for i = 1:numel(C)
   [~, locs] = findpeaks(C{i},'minpeakheight',H{i},'minpeakdistance',mPSI);
endfor

Thank you

On Wed, Jan 29, 2014 at 6:58 PM, Andrew Knyazev <address@hidden> wrote:
Dear Juan Pablo Carbajal,

Thank you for contributing your findpeaks Octave code to the community!

May I have a small request for improvement? It appears that the function
findpeaks cannot be used from cellfun, as it gives an error, e.g.,:

[~, locs] =
cellfun(@(x,y)findpeaks(x,'minpeakheight',y,'minpeakdistance',mPSI), ...
     num2cell(abs(dCd),1),num2cell(mPH,1),'UniformOutput',0);

error: findpeaks: subscript indices must be either positive integers or
logicals
error: called from:
error:
C:\Octave\Octave3.6.4_gcc4.6.2\share\octave\packages\signal-1.2.1\findpeaks.m
at line 126, column 5

The above works in MATLAB 2010b

It would be nice if this issue could be fixed in future releases.

Best regards, Andrew





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