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Re: rsync: link_stat error
From: |
Ole Tange |
Subject: |
Re: rsync: link_stat error |
Date: |
Thu, 13 Mar 2014 14:19:34 +0100 |
Please follow the guidelines for reporting bugs as mentioned in man parallel:
Your bug report should always include:
· The error message you get (if any).
· The complete output of parallel --version. If you are not running
the latest released version you should specify why you believe the
problem is not fixed in that version.
· A complete example that others can run that shows the problem. This
should preferably be small and simple. A combination of yes, seq,
cat, echo, and sleep can reproduce most errors. If your example
requires large files, see if you can make them by something like seq
1000000 > file or yes | head -n 10000000 > file. If your example
requires remote execution, see if you can use localhost.
· The output of your example. If your problem is not easily reproduced
by others, the output might help them figure out the problem.
· Whether you have watched the intro videos
(http://www.youtube.com/playlist?list=PL284C9FF2488BC6D1), walked
through the tutorial (man parallel_tutorial), and read the EXAMPLE
section in the man page (man parallel - search for EXAMPLE:).
If you suspect the error is dependent on your environment or
distribution, please see if you can reproduce the error on one of
these VirtualBox images:
http://sourceforge.net/projects/virtualboximage/files/
Specifying the name of your distribution is not enough as you may have
installed software that is not in the VirtualBox images.
If you cannot reproduce the error on any of the VirtualBox images
above, you should assume the debugging will be done through you. That
will put more burden on you and it is extra important you give any
information that help.
/Ole
On Thu, Mar 13, 2014 at 1:00 PM, V A Ramesh <varavind121@yahoo.com> wrote:
> Dear all,
>
> I was trying to run parallel both on my local and remote computer using
> following command. If I tried to run the command separately(via SSH) for two
> machines it is working fine.
>
> parallel --eta -S 2/ramesh@10.117.173.73,: --trc {.}.ss_sa
> 'predict_ss_sa.sh {} {.}.ss_sa' < list_h
>
>
>
> I was getting the following error messages
>
> rsync: link_stat "/home/ramesh/./sp_A0AV02_S12A8_HUMAN.ss_sa" failed: No
> such file or directory (2)
> rsync error: some files/attrs were not transferred (see previous errors)
> (code 23) at main.c(1505) [receiver=3.0.6]
> bash: predict_ss_sa.sh: command not found
> rsync: link_stat "/home/ramesh/./sp_A0AV96_RBM47_HUMAN.ss_sa" failed: No
> such file or directory (2)
> rsync error: some files/attrs were not transferred (see previous errors)
> (code 23) at main.c(1505) [receiver=3.0.6]
> ETA: 11s Left: 8 AVG: 2.00s ramesh@10.117.173.73:2/2/100%/2.0s bash:
> predict_ss_sa.sh: command not found
> rsync: link_stat "/home/ramesh/./sp_A0AVF1_TTC26_HUMAN.ss_sa" failed: No
> such file or directory (2)
> //
> rsync error: some files/attrs were not transferred (see previous errors)
> (code 23) at main.c(1505) [receiver=3.0.6]
> ETA: 2s Left: 0 AVG: 1.00s ramesh@10.117.173.73:0/10/100%/1.0s
>
> Any help would be appreciated.
>
>
> --
> Vakkalagadda A Ramesh
> Jr. Research Fellow
> Lab of Computational Biology
> Centre for DNA Fingerprinting and Diagnostics (CDFD)
> Nampally
> Hyderabad-500001
> Lab: 040-24749368
> Mobile: 08686363632
>
>