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bug#42141: blast+ is not reproducible
From: |
Ricardo Wurmus |
Subject: |
bug#42141: blast+ is not reproducible |
Date: |
Thu, 29 Sep 2022 11:24:22 +0200 |
User-agent: |
mu4e 1.8.9; emacs 28.1 |
reopen 42141
thanks
Maxim Cournoyer <maxim.cournoyer@gmail.com> writes:
> Hi,
>
> Ricardo Wurmus <rekado@elephly.net> writes:
>
>> This should be rather easy to fix:
>>
>> diff -r
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check
>> diff -r
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
>> /gnu/store/3y97kfanv9ynxnahyykixchlbpbyvjmm-blast+-2.10.1-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
>> 4,13c4,13
>> < #define NCBI_RANDOM_VALUE_0 1770246234u
>> < #define NCBI_RANDOM_VALUE_1 2685550394u
>> < #define NCBI_RANDOM_VALUE_2 1952513968u
>> < #define NCBI_RANDOM_VALUE_3 4081691487u
>> < #define NCBI_RANDOM_VALUE_4 1126642990u
>> < #define NCBI_RANDOM_VALUE_5 2363626105u
>> < #define NCBI_RANDOM_VALUE_6 444644742u
>> < #define NCBI_RANDOM_VALUE_7 2799580837u
>> < #define NCBI_RANDOM_VALUE_8 216161479u
>> < #define NCBI_RANDOM_VALUE_9 992434062u
>> ---
>>> #define NCBI_RANDOM_VALUE_0 2851596927u
>>> #define NCBI_RANDOM_VALUE_1 4039058594u
>>> #define NCBI_RANDOM_VALUE_2 3204116600u
>>> #define NCBI_RANDOM_VALUE_3 4270143185u
>>> #define NCBI_RANDOM_VALUE_4 1366873742u
>>> #define NCBI_RANDOM_VALUE_5 703144487u
>>> #define NCBI_RANDOM_VALUE_6 2507785646u
>>> #define NCBI_RANDOM_VALUE_7 3995716134u
>>> #define NCBI_RANDOM_VALUE_8 907933519u
>>> #define NCBI_RANDOM_VALUE_9 1149060107u
>
> Not anymore, according to:
>
> $ guix challenge blast+
>
> 1 store items were analyzed:
> - 1 (100.0%) were identical
> - 0 (0.0%) differed
> - 0 (0.0%) were inconclusive
This is still a problem:
--8<---------------cut here---------------start------------->8---
$ diff -ru /gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check
diff -ru
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h
---
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h
1970-01-01 01:00:01.000000000 +0100
+++
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbiconf_unix.h
1970-01-01 01:00:01.000000000 +0100
@@ -1095,7 +1095,7 @@
/* Build signature: compiler-name '_' compiler-version '-' configuration '--'
platform-name '-' hostname */
-#define NCBI_SIGNATURE
"GCC_1030-DebugMTDLL64--x86_64-unknown-linux5.15.10-gnu2.33-localhost"
+#define NCBI_SIGNATURE
"GCC_1030-DebugMTDLL64--x86_64-unknown-linux5.15.59-gnu2.33-localhost"
/* Define to 1 if SQLColAttribute's last argument is an SQLLEN * */
#define NCBI_SQLCOLATTRIBUTE_SQLLEN 1
diff -ru
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
---
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
1970-01-01 01:00:01.000000000 +0100
+++
/gnu/store/0kbsdr61qpj0vkc6s8g2kbp4dq936n0p-blast+-2.11.0-include-check/include/ncbi-tools++/ncbi-tools++/ncbi_random_macro.h
1970-01-01 01:00:01.000000000 +0100
@@ -1,13 +1,13 @@
#define NCBI_RANDOM_VALUE_TYPE Uint4
#define NCBI_RANDOM_VALUE_MIN 0
#define NCBI_RANDOM_VALUE_MAX 0xffffffffu
-#define NCBI_RANDOM_VALUE_0 3249030781u
-#define NCBI_RANDOM_VALUE_1 3573796697u
-#define NCBI_RANDOM_VALUE_2 2130009325u
-#define NCBI_RANDOM_VALUE_3 4284761029u
-#define NCBI_RANDOM_VALUE_4 3467737853u
-#define NCBI_RANDOM_VALUE_5 3267844710u
-#define NCBI_RANDOM_VALUE_6 4107058373u
-#define NCBI_RANDOM_VALUE_7 166436459u
-#define NCBI_RANDOM_VALUE_8 960927418u
-#define NCBI_RANDOM_VALUE_9 3839848519u
+#define NCBI_RANDOM_VALUE_0 2845495105u
+#define NCBI_RANDOM_VALUE_1 2158634051u
+#define NCBI_RANDOM_VALUE_2 4072202242u
+#define NCBI_RANDOM_VALUE_3 902228395u
+#define NCBI_RANDOM_VALUE_4 1353323915u
+#define NCBI_RANDOM_VALUE_5 574823513u
+#define NCBI_RANDOM_VALUE_6 4119501261u
+#define NCBI_RANDOM_VALUE_7 2477640938u
+#define NCBI_RANDOM_VALUE_8 2776595395u
+#define NCBI_RANDOM_VALUE_9 270550684u
--8<---------------cut here---------------end--------------->8---
--
Ricardo
- bug#42141: blast+ is not reproducible, Maxim Cournoyer, 2022/09/28
- bug#42141: blast+ is not reproducible,
Ricardo Wurmus <=
- bug#42141: blast+ is not reproducible, Ricardo Wurmus, 2022/09/29
- bug#42141: blast+ is not reproducible, Ricardo Wurmus, 2022/09/29
- bug#42141: blast+ is not reproducible, Maxim Cournoyer, 2022/09/29
- bug#42141: blast+ is not reproducible, Ricardo Wurmus, 2022/09/30
- bug#42141: blast+ is not reproducible, zimoun, 2022/09/30
- bug#42141: blast+ is not reproducible, Ricardo Wurmus, 2022/09/30
- bug#42141: blast+ is not reproducible, Maxim Cournoyer, 2022/09/30