[bug #16053] second stem overwrites the first per-prerequisite stem

[Boris Kolpackov]

Follow-up Comment #1, bug #16053 (project make):

Attaching a minimized test case. It prints "all.foo.one all.foo.two" while
should print "all.one all.foo.two".

I also checked the code and it seems that keeping stem in prerequisites is
the best way to solve this. I am not sure, however, if we should do it for
3.81. There will be quite a bit of changes.
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