bug#42090: closed ([PATCH] gnu: Add r-shapforxgboost.)

[GNU bug Tracking System]

Your message dated Sat, 27 Jun 2020 23:18:29 +0200
with message-id <87k0zsp5qy.fsf@elephly.net>
and subject line Re: [bug#42090] [PATCH] gnu: Add r-shapforxgboost.
has caused the debbugs.gnu.org bug report #42090,
regarding [PATCH] gnu: Add r-shapforxgboost.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs@gnu.org.)


-- 
42090: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=42090
GNU Bug Tracking System
Contact help-debbugs@gnu.org with problems
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-shapforxgboost.
>
>
>
>
> Date: 
>
> Sun, 28 Jun 2020 01:48:58 +0800
>
>
>
>
> * gnu/packages/cran.scm (r-shapforxgboost): New variable.
> ---
>  gnu/packages/cran.scm | 35 +++++++++++++++++++++++++++++++++++
>  1 file changed, 35 insertions(+)
>
> diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
> index ab5e57c0e2..8e2a9433c1 100644
> --- a/gnu/packages/cran.scm
> +++ b/gnu/packages/cran.scm
> @@ -22325,3 +22325,38 @@ across a wide array of bioinformatic R packages.")
>  and clustering large sequence datasets using fast alignment-free k-mer
>  counting and recursive k-means partitioning.")
>      (license license:gpl3)))
> +
> +(define-public r-shapforxgboost
> +  (package
> +    (name "r-shapforxgboost")
> +    (version "0.0.4")
> +    (source
> +      (origin
> +        (method url-fetch)
> +        (uri (cran-uri "SHAPforxgboost" version))
> +        (sha256
> +          (base32
> +            "0k6bg27wqnkzv82bcahbapmqhiz6rvnx81m23zbjw58c7lwshgnq"))))
> +    (properties
> +      `((upstream-name . "SHAPforxgboost")))
> +    (build-system r-build-system)
> +    (propagated-inputs
> +      `(("r-bbmisc" ,r-bbmisc)
> +        ("r-data-table" ,r-data-table)
> +        ("r-ggextra" ,r-ggextra)
> +        ("r-ggforce" ,r-ggforce)
> +        ("r-ggplot2" ,r-ggplot2)
> +        ("r-ggpubr" ,r-ggpubr)
> +        ("r-rcolorbrewer" ,r-rcolorbrewer)
> +        ("r-xgboost" ,r-xgboost)))
> +    (home-page
> +      "https://github.com/liuyanguu/SHAPforxgboost";)
> +    (synopsis "SHAP Plots for 'XGBoost'")
> +    (description
> +      "The aim of @code{SHAPforxgboost} is to aid in visual data
> +investigations using SHAP (SHapley Additive exPlanation) visualization
> +plots for @code{XGBoost}.  It provides summary plot, dependence plot,
> +interaction plot, and force plot.  It relies on the 'dmlc/xgboost'
> +package to produce SHAP values.  Please refer to 'slundberg/shap' for
> +the original implementation of SHAP in 'Python'.")
> +    (license license:expat)))
> -- 
> 2.17.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> Re: [bug#42090] [PATCH] gnu: Add r-shapforxgboost.
>
>
>
>
> Date: 
>
> Sat, 27 Jun 2020 23:18:29 +0200
>
>
>
>
> User-agent: 
>
> mu4e 1.4.10; emacs 26.3
>
>
>
>
> Hi Peter,
>
> > * gnu/packages/cran.scm (r-shapforxgboost): New variable.
>
> Thank you!
>
> I made a couple of minor changes and pushed it to the master branch with
> commit bc36937431.
>
> -- 
> Ricardo
>
>
> --- End Message ---