bug#45699: closed ([PATCH] gnu: python-scipy: Update to 1.6.0.)

[GNU bug Tracking System]

Your message dated Tue, 09 Feb 2021 16:50:21 +0100
with message-id <86wnvh44w2.fsf@fsfe.org>
and subject line Re: [bug#45699] [PATCH] gnu: python-scipy: Update to 1.6.0.
has caused the debbugs.gnu.org bug report #45699,
regarding [PATCH] gnu: python-scipy: Update to 1.6.0.
to be marked as done.

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-- 
45699: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=45699
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--- Begin Message --- Subject: [PATCH] gnu: python-scipy: Update to 1.6.0. Date: Wed, 6 Jan 2021 13:47:58 -0500

From d03cf7fcf8351827dcf5d1a342c26bc5ffee7046 Mon Sep 17 00:00:00 2001

From: Greg Hogan <code@greghogan.com>

Date: Tue, 5 Jan 2021 17:09:15 +0000

Subject: [PATCH] gnu: python-scipy: Update to 1.6.0.

* gnu/packages/python-xyz.scm (python-scipy): Update to 1.6.0.

[inputs]: Add pybind11.

[arguments]<#:phases>['change-home-dir]: New phase.

---

 gnu/packages/python-science.scm | 13 ++++++++++---

 1 file changed, 10 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm

index 99903ef247..a1e2b57669 100644

--- a/gnu/packages/python-science.scm

+++ b/gnu/packages/python-science.scm

@@ -10,6 +10,7 @@

 ;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>

 ;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>

 ;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>

+;;; Copyright © 2021 Greg Hogan <code@greghogan.com>

 ;;;

 ;;; This file is part of GNU Guix.

 ;;;

@@ -50,13 +51,13 @@

 (define-public python-scipy

   (package

     (name "python-scipy")

-    (version "1.3.2")

+    (version "1.6.0")

     (source

      (origin

        (method url-fetch)

        (uri (pypi-uri "scipy" version))

        (sha256

-        (base32 "192d8dsybvhv19igkrsafbdafx198nz7pibkjgrqjhlr66s3jfd0"))))

+        (base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))

     (build-system python-build-system)

     (propagated-inputs

      `(("python-numpy" ,python-numpy)

@@ -64,7 +65,8 @@

        ("python-pyparsing" ,python-pyparsing)))

     (inputs

      `(("lapack" ,lapack)

-       ("openblas" ,openblas)))

+       ("openblas" ,openblas)

+       ("pybind11" ,pybind11)))

     (native-inputs

      `(("python-cython" ,python-cython)

        ("python-pytest" ,python-pytest)

@@ -77,6 +79,11 @@

     (arguments

      `(#:phases

        (modify-phases %standard-phases

+         (add-before 'build 'change-home-dir

+           (lambda _

+             ;; Change from /homeless-shelter to /tmp for write permission.

+             (setenv "HOME" "/tmp")

+             #t))

          (add-after 'unpack 'disable-broken-tests

            (lambda _

              (substitute* "scipy/sparse/linalg/dsolve/tests/test_linsolve.py"

-- 

2.30.0

0001-gnu-python-scipy-Update-to-1.6.0.patch
Description: Binary data

--- End Message ---

> --- Begin Message ---
>
>
>
> Subject: 
>
> Re: [bug#45699] [PATCH] gnu: python-scipy: Update to 1.6.0.
>
>
>
>
> Date: 
>
> Tue, 09 Feb 2021 16:50:21 +0100
>
>
>
>
> Greg Hogan <code@greghogan.com> writes:
>
> > From d03cf7fcf8351827dcf5d1a342c26bc5ffee7046 Mon Sep 17 00:00:00 2001
> > From: Greg Hogan <code@greghogan.com>
> > Date: Tue, 5 Jan 2021 17:09:15 +0000
> > Subject: [PATCH] gnu: python-scipy: Update to 1.6.0.
> >
> > * gnu/packages/python-xyz.scm (python-scipy): Update to 1.6.0.
> > [inputs]: Add pybind11.
> > [arguments]<#:phases>['change-home-dir]: New phase.
>
> Pushed as 2571cf025e61f9f767e316841961904912beedf0 to master, thanks!
>
>
> --- End Message ---