bug#47930: closed ([PATCH] gnu: Add pbgzip.)

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Your message dated Fri, 30 Apr 2021 18:47:59 +0200
with message-id <288c615cc9a12c6333a28f7002429140c2924ae5.camel@gnu.org>
and subject line Re: [bug#47930] [PATCH] gnu: Add pbgzip.
has caused the debbugs.gnu.org bug report #47930,
regarding [PATCH] gnu: Add pbgzip.
to be marked as done.

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--- Begin Message --- Subject: [PATCH] gnu: Add pbgzip. Date: Wed, 21 Apr 2021 14:26:47 +0200 User-agent: Mozilla/5.0 (X11; Linux x86_64; rv:78.0) Gecko/20100101 Thunderbird/78.7.1

Hi Guix,

Here's a patch to add pbgzip.  Lint complains that there is no release on the Github page, but there's nothing I can do about it.

Kind regards,
Roel Janssen

0001-gnu-Add-pbgzip.patch
Description: Text Data

--- End Message ---

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> Subject: 
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> Re: [bug#47930] [PATCH] gnu: Add pbgzip.
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> Date: 
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> Fri, 30 Apr 2021 18:47:59 +0200
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> User-agent: 
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> Evolution 3.40.0 (3.40.0-1.fc34) 
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> On Fri, 2021-04-30 at 14:53 +0300, Efraim Flashner wrote:
> > 
> > 
> > > From 1af29f66980ba19740e05a27135f141e23b7fd3f Mon Sep 17 00:00:00
> > > 2001
> > > From: Roel Janssen <roel@gnu.org>
> > > Date: Fri, 30 Apr 2021 13:47:43 +0200
> > > Subject: [PATCH] gnu: Add pbgzip.
> > > 
> > > ...
> > > +      (synopsis "Parallel Block GZIP")
> > > +      (description "This package implements parallel block gzip. 
> > > For many
> > > +formats, in particular genomics data formats, data are compressed
> > > in
> > 
> > I wasn't sure about 'data are' vs 'data is' but I think data here is
> > plural, so 'data are' should be right.
> > 
> > > +fixed-length blocks such that they can be easily indexed based on
> > > a (genomic)
> > > +coordinate order, since typically each block is sorted according
> > > to this order.
> > > +This allows for each block to be individually compressed
> > > (deflated), or more
> > > +importantly, decompressed (inflated), with the latter enabling
> > > random retrieval
> > > +of data in large files (gigabytes to terabytes).  @code{pbgzip} is
> > > not limited
> > > +to any particular format, but certain features are tailored to
> > > genomics data
> > > +formats when enabled.  Parallel decompression is somewhat faster,
> > > but the true
> > > +speedup comes during compression.")
> > > +      (license license:expat))))
> > > +
> > >  (define-public blasr-libcpp
> > >    (package
> > >      (name "blasr-libcpp")
> > > -- 
> > > 2.31.1
> > > 
> > 
> > Looks good to me!
> > 
>
> Thank you Efraim, and thank you Xinglu Chen.
> I pushed this patch.
>
> Kind regards,
> Roel Janssen
>
>
>
>
> --- End Message ---