bug#55218: closed ([PATCH] gnu: Add r-agimicrorna.)

[GNU bug Tracking System]

Your message dated Mon, 02 May 2022 16:54:30 +0200
with message-id <878rrkx9vx.fsf@elephly.net>
and subject line Re: [bug#55218] [PATCH] gnu: Add r-agimicrorna.
has caused the debbugs.gnu.org bug report #55218,
regarding [PATCH] gnu: Add r-agimicrorna.
to be marked as done.

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-- 
55218: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=55218
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> --- Begin Message ---
>
>
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> Subject: 
>
> [PATCH] gnu: Add r-agimicrorna.
>
>
>
>
> Date: 
>
> Mon, 2 May 2022 11:37:34 +0200
>
>
>
>
> * gnu/packages/bioconductor.scm (r-agimicrorna): New variable.
> ---
>  gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
>  1 file changed, 30 insertions(+)
>
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index a78903becc..78075de4e0 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -1877,6 +1877,36 @@ (define-public r-agilp
>      ;; GPLv3.
>      (license license:gpl3)))
>  
> +(define-public r-agimicrorna
> +  (package
> +    (name "r-agimicrorna")
> +    (version "2.46.0")
> +    (source (origin
> +              (method url-fetch)
> +              (uri (bioconductor-uri "AgiMicroRna" version))
> +              (sha256
> +               (base32
> +                "0jic89gyphbv7jzlfgm9bh1aq48lp86rq6hr34gsg9z0pa1192xa"))))
> +    (properties `((upstream-name . "AgiMicroRna")))
> +    (build-system r-build-system)
> +    (propagated-inputs
> +     (list r-affy
> +           r-affycoretools
> +           r-biobase
> +           r-limma
> +           r-preprocesscore))
> +    (home-page "https://git.bioconductor.org/packages/AgiMicroRna";)
> +    (synopsis
> +     "Processing and differential expression analysis of Agilent microRNA 
> chips")
> +    (description
> +     "@code{AgiMicroRna} provides useful functionality for the processing, 
> quality
> +assessment and differential expression analysis of Agilent microRNA array data.
> +The package uses a limma-like structure to generate the processed data in order
> +to make statistical inferences about differential expression using the linear
> +model features implemented in limma.  Standard Bioconductor objects are used so
> +that other packages could be used as well.")
> +    (license license:gpl3)))
> +
>  (define-public r-aneufinder
>    (package
>      (name "r-aneufinder")
>
> base-commit: 098f2eea331121905e3c867f478b22cea3510841
> -- 
> 2.36.0
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> Re: [bug#55218] [PATCH] gnu: Add r-agimicrorna.
>
>
>
>
> Date: 
>
> Mon, 02 May 2022 16:54:30 +0200
>
>
>
>
> User-agent: 
>
> mu4e 1.6.10; emacs 28.0.50
>
>
>
>
> Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
>
> > * gnu/packages/bioconductor.scm (r-agimicrorna): New variable.
>
> Applied, thanks.
>
> -- 
> Ricardo
>
>
> --- End Message ---