bug#60885: closed ([PATCH 0/4] Some bioinfo packages)

[GNU bug Tracking System]

Your message dated Fri, 20 Jan 2023 10:56:54 +0100
with message-id <87zgadh6k7.fsf@elephly.net>
and subject line [PATCH 0/4] Some bioinfo packages
has caused the debbugs.gnu.org bug report #60885,
regarding [PATCH 0/4] Some bioinfo packages
to be marked as done.

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60885: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=60885
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> --- Begin Message ---
>
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> Subject: 
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> [PATCH 0/4] Some bioinfo packages
>
>
>
>
> Date: 
>
> Tue, 17 Jan 2023 18:26:50 +0100
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>
>
>
> Hi,
>
> Here some pacakages used in Bioinformatics.
>
> Note that the package numbat comes with 'bin/pileup_and_phase.R' for preparing
> the data, as explained in online documentation [1].
>
> Here, this script goes under 'site-library/numbat/bin' which does not
> perfectly match the online documentation mentioning 'numbat/inst/bin/'
> instead.
>
> 1: https://kharchenkolab.github.io/numbat/articles/numbat.html
>
> Cheers,
> simon
>
> Simon Tournier (4):
>   gnu: Add python-vireosnp.
>   gnu: Add r-scistreer.
>   gnu: Add r-roptim.
>   gnu: Add r-numbat.
>
>  gnu/packages/bioconductor.scm   | 106 +++++++++++++++++++++++++++++++-
>  gnu/packages/bioinformatics.scm |  22 +++++++
>  gnu/packages/cran.scm           |  23 ++++++-
>  3 files changed, 149 insertions(+), 2 deletions(-)
>
>
> base-commit: ecda67a577570f412b103e5dd8ed1a44193a9c11
> -- 
> 2.38.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH 0/4] Some bioinfo packages
>
>
>
>
> Date: 
>
> Fri, 20 Jan 2023 10:56:54 +0100
>
>
>
>
> User-agent: 
>
> mu4e 1.8.13; emacs 28.2
>
>
>
>
> Thank you for the patches!  I applied them with very minor changes to
> descriptions.
>
> -- 
> Ricardo
>
>
> --- End Message ---