After recently upgrading to 20161118, I notice that the clock-in property in my org-capture-templates is no longer functioning. It appears to successfully clock me out of my current task, but that's it.
My capture template is:
(setq org-capture-templates
"* TODO %?\n%U\n" :clock-in t :clock-resume t)))
I'm running Emacs 25.1.1 on Windows.