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[ESPResSo-users] OIF_Implementation - Creating Template

From: Wink, Markus
Subject: [ESPResSo-users] OIF_Implementation - Creating Template
Date: Wed, 11 Mar 2015 09:31:11 +0000

Hello everybody,


I have got a question concerning creating a template for using the oif-implementation.


After creating my mesh-nodes and triangulization, I wanted to check, whether I have done it correctly. For that I used the command


oif_mesh_analyze nodes-file $fileNodes triangles-file $output orientation 1


I noticed, that the facets of the triangles showed in the wrong direction. So I used


oif_mesh_analyze nodes-file $fileNodes triangles-file $fileTriangles repair $output 1


to achieve the right orientation of the facets. But: After checking, if the repaired facets are correct (using the command “orientatin 1” again on the new triangle-file), I get as an output “error s” (see output at the bottom of the message).


Does anybody knows where does error message comes from? Shall I be worried about it?


Thank you very much for your help.








The following oif_template will be created:

        nodes-file:     sphere_nodes.dat

        triangles-file: sphere_triangles.dat

        ks:             0.0

        kb:             0.0

        kal:            0.0

        kag:            0.0

        kv:             0.0

        stretch:        1.0 1.0 1.0

Data extracted from the input files:

        nnodes:         234

        ntriangles:     464

The following oif_object will be created:

        template_id:    0

        mass:           1

        particle_type:  0

        mol:            0

        rotate:         0 0 0

        origin:         50 50 50

generating particles

error s



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