[gnuastro-commits] master updated (33b7b70 -> f5d7d1a)

[Mohammad Akhlaghi]

makhlaghi pushed a change to branch master.

      from  33b7b70   Book: corrected example of --catrowfile
       new  c36f753   Match: Option to work with k-d trees has been defined
       new  0dcaf02   Match: Added build functionalty for kdtree
       new  e04f4ac   First implementation of k-d tree matching, not complete
       new  336ddee   Error in `match_kdtree_worker` in lib/match.c
       new  2877acb   Added fits files for testing in `during-dev-test-data`
       new  8b17675   Corrected segmentation fault, included aperture
       new  20ad77d   Final output for kdtree matching
       new  6f7ff61   Library (match.h): Using the old infra-structure for 
double-matches
       new  7354e33   Library (match.h): match_coordinate_ replaced by 
match_sort_based_
       new  d0b19b8   Match: make check script for k-d tree matching now 
executable
       new  a7bfa5b   Match: k-d tree matching UI fixed, to do: finalizing docs 
and tests
       new  48d760d   Library (match.h): k-d tree method discards regions with 
no overlap
       new  095c788   Match: matched rows aren't permuted, but new column 
allocated
       new  9e258a8   Library (fits.h): reading table columns now done in 
parallel
       new  03d1a25   Library (fits.h): corrected segmentation fault in 
parallel reading
       new  29f8b20   Table and Arithmetic: corrected some memory leaks
       new  68823e3   Library (fits.h): correctly reading columns of 0 
width/repeat
       new  a6b838c   Match: script to generate debugging input taken in 
bin/match/
       new  f5d7d1a   Match: added tests, completed docs of new k-d tree based 
matching


Summary of changes:
 NEWS                                               |   40 +
 THANKS                                             |    1 +
 bin/arithmetic/ui.c                                |    1 +
 bin/convolve/ui.c                                  |   15 +-
 bin/crop/ui.c                                      |    4 +-
 bin/match/args.h                                   |   26 +
 bin/match/astmatch.conf                            |    2 +
 bin/match/debug-1.sh                               |   59 +
 bin/match/main.h                                   |   15 +
 bin/match/match.c                                  |  438 ++++--
 bin/match/ui.c                                     |  252 +++-
 bin/match/ui.h                                     |    4 +-
 bin/mkprof/ui.c                                    |   24 +-
 bin/query/query.c                                  |   12 +-
 bin/statistics/ui.c                                |    4 +-
 bin/table/table.c                                  |   27 +-
 bin/table/ui.c                                     |    7 +-
 doc/announce-acknowledge.txt                       |    1 +
 doc/gnuastro.texi                                  |  413 ++++--
 lib/binary.c                                       |   39 +
 lib/blank.c                                        |   17 +-
 lib/fits.c                                         |  240 +++-
 lib/gnuastro-internal/tableintern.h                |   17 +-
 lib/gnuastro/fits.h                                |    4 +-
 lib/gnuastro/match.h                               |    9 +-
 lib/gnuastro/table.h                               |    3 +-
 lib/match.c                                        | 1438 +++++++++++++-------
 lib/options.c                                      |   14 +-
 lib/statistics.c                                   |   12 +-
 lib/table.c                                        |   43 +-
 lib/tableintern.c                                  |    2 +-
 lib/threads.c                                      |   17 +-
 lib/txt.c                                          |    5 +-
 tests/Makefile.am                                  |    7 +-
 tests/match/{merged-cols.sh => kdtree-internal.sh} |   14 +-
 tests/match/{merged-cols.sh => kdtree-separate.sh} |   13 +-
 tests/match/merged-cols.sh                         |    2 +-
 tests/match/{positions.sh => sort-based.sh}        |    7 +-
 tests/table/table.txt                              |    2 +-
 39 files changed, 2312 insertions(+), 938 deletions(-)
 create mode 100755 bin/match/debug-1.sh
 copy tests/match/{merged-cols.sh => kdtree-internal.sh} (77%)
 copy tests/match/{merged-cols.sh => kdtree-separate.sh} (76%)
 rename tests/match/{positions.sh => sort-based.sh} (84%)