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[Gsrc-commit] trunk r4765: update cufflinks to 2.2.1
From: |
Carl Hansen |
Subject: |
[Gsrc-commit] trunk r4765: update cufflinks to 2.2.1 |
Date: |
Sat, 23 Sep 2017 00:34:34 -0400 (EDT) |
User-agent: |
Bazaar (2.7.0dev1) |
------------------------------------------------------------
revno: 4765
revision-id: address@hidden
parent: address@hidden
committer: address@hidden
branch nick: trunk
timestamp: Fri 2017-09-22 21:34:29 -0700
message:
update cufflinks to 2.2.1
modified:
pkg/bio/cufflinks/Makefile makefile-20160617195624-kwz1a09vkg4le6fu-95
pkg/bio/cufflinks/sha256sums sha256sums-20160617195624-kwz1a09vkg4le6fu-96
=== modified file 'pkg/bio/cufflinks/Makefile'
--- a/pkg/bio/cufflinks/Makefile 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/cufflinks/Makefile 2017-09-23 04:34:29 +0000
@@ -1,4 +1,5 @@
# Copyright © 2014 Brandon Invergo <address@hidden>
+# Copyright © 2017 Carl Hansen <address@hidden>
#
# This file is part of BioSRC.
#
@@ -17,8 +18,9 @@
NAME = Cufflinks
GARNAME = cufflinks
-GARVERSION = 2.1.1
-HOME_URL = http://cufflinks.cbcb.umd.edu/
+GARVERSION = 2.2.1
+#HOME_URL = http://cufflinks.cbcb.umd.edu/
+HOME_URL = http://cole-trapnell-lab.github.io/cufflinks/
DESCRIPTION = Transcript assembly and abundance estimation for RNA-Seq
define BLURB
Cufflinks is a tool that assembles transcripts and estimates their
@@ -29,9 +31,10 @@
CITE = doi:10.1038/nbt.1621
######################################################################
+#
http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.tar.gz
-MASTER_SITES = http://cufflinks.cbcb.umd.edu/
-MASTER_SUBDIR = downloads/
+MASTER_SITES = http://cole-trapnell-lab.github.io/
+MASTER_SUBDIR = cufflinks/assets/downloads/
DISTFILES = $(DISTNAME).tar.gz
BUILDDEPS =
=== modified file 'pkg/bio/cufflinks/sha256sums'
--- a/pkg/bio/cufflinks/sha256sums 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/cufflinks/sha256sums 2017-09-23 04:34:29 +0000
@@ -1,1 +1,1 @@
-9cbaf1d8f53aa53e6d6beec12420125ee487f9de520417a6b1add3306d01a81e
download/cufflinks-2.1.1.tar.gz
+e8316b66177914f14b3a0c317e436d386a46c4c212ca1b2326f89f8a2e08d5ae
download/cufflinks-2.2.1.tar.gz
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