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[Gsrc-commit] trunk r4844: update weeder to 2.0.1
From: |
Carl Hansen |
Subject: |
[Gsrc-commit] trunk r4844: update weeder to 2.0.1 |
Date: |
Fri, 20 Oct 2017 14:45:36 -0400 (EDT) |
User-agent: |
Bazaar (2.7.0dev1) |
------------------------------------------------------------
revno: 4844
revision-id: address@hidden
parent: address@hidden
committer: address@hidden
branch nick: trunk
timestamp: Fri 2017-10-20 11:45:32 -0700
message:
update weeder to 2.0.1
modified:
pkg/bio/weeder/Makefile makefile-20160617195624-kwz1a09vkg4le6fu-199
pkg/bio/weeder/sha256sums sha256sums-20160617195624-kwz1a09vkg4le6fu-200
=== modified file 'pkg/bio/weeder/Makefile'
--- a/pkg/bio/weeder/Makefile 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/weeder/Makefile 2017-10-20 18:45:32 +0000
@@ -1,4 +1,5 @@
# Copyright © 2013, 2014 Brandon Invergo <address@hidden>
+# Copyright © 2017 Carl Hansen <address@hidden>
#
# This file is part of GSRC.
#
@@ -17,9 +18,10 @@
NAME = Weeder
GARNAME = weeder
-GARVERSION = 2.0
+GARVERSION = 2.0.1
HOME_URL = http://159.149.160.51/modtools/
-DESCRIPTION = Motif discovery in sequences from co-regulated genes
+ # see also https://omictools.com/weeder-tool
+DESCRIPTION = MOtif discovery in nucleotide sequences from co-regulated genes
define BLURB
Weeder is a tool for transcription factor binding motif discovery from
co-regulated genes of a single species. It has been optimized for
@@ -28,19 +30,24 @@
LICENSE = GPLv3
CITE = PMID:16845071
+# The executable is called "weeder2"
+
######################################################################
-
+# http://159.149.160.51/modtools/downloads/weeder2.0.1.tar.gz
MASTER_SITES = http://159.149.160.51/
MASTER_SUBDIR = modtools/downloads/
DISTNAME = $(GARNAME)$(GARVERSION)
DISTFILES = $(DISTNAME).tar.gz
-EXTRACTDIR = $(WORKSRC)
+#EXTRACTDIR = $(WORKSRC)
+WORKSRC= $(WORKDIR)/Weeder2.0/
BUILD_SCRIPTS = bin
INSTALL_SCRIPTS = data bin
BUILDDEPS =
LIBDEPS =
+
+
######################################################################
include ../../../gar/gar.mk
@@ -61,3 +68,6 @@
install -m755 $(WORKSRC)/weeder2 $(packageprefix)/share/weeder2/weeder2
$(SYMLINK_BIN) $(prefix)/share/weeder2/weeder2 weeder2
$(MAKECOOKIE)
+
+
+
=== modified file 'pkg/bio/weeder/sha256sums'
--- a/pkg/bio/weeder/sha256sums 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/weeder/sha256sums 2017-10-20 18:45:32 +0000
@@ -1,1 +1,1 @@
-1bd21b26369a1cd90c59af3b94c9cacd516308231b27da9475af250b58b6ad33
download/weeder2.0.tar.gz
+94f5de83a7389da1bf30b8752d7018ef643387e8de428f47b026b12202508357
download/weeder2.0.1.tar.gz
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