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11/36: gnu: Add AnnotationDbi.


From: Ricardo Wurmus
Subject: 11/36: gnu: Add AnnotationDbi.
Date: Thu, 07 Jan 2016 16:19:07 +0000

rekado pushed a commit to branch master
in repository guix.

commit 8b7bce740d507d544b6634b0f60be9450b36c5fc
Author: Ricardo Wurmus <address@hidden>
Date:   Fri Dec 18 14:06:28 2015 +0100

    gnu: Add AnnotationDbi.
    
    * gnu/packages/bioinformatics.scm (r-annotationdbi): New variable.
---
 gnu/packages/bioinformatics.scm |   27 +++++++++++++++++++++++++++
 1 files changed, 27 insertions(+), 0 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 54fc051..9577f71 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3488,6 +3488,33 @@ manipulating genomic intervals and variables defined 
along a genome.")
 on Bioconductor or which replace R functions.")
     (license license:artistic2.0)))
 
+(define-public r-annotationdbi
+  (package
+    (name "r-annotationdbi")
+    (version "1.32.2")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "AnnotationDbi" version))
+              (sha256
+               (base32
+                "08ncdjvq0l44kqyiv32kn9wnbw1xgfb6qjfzfbjpqrcfp1jygz9j"))))
+    (properties
+     `((upstream-name . "AnnotationDbi")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biobase" ,r-biobase)
+       ("r-biocgenerics" ,r-biocgenerics)
+       ("r-dbi" ,r-dbi)
+       ("r-iranges" ,r-iranges)
+       ("r-rsqlite" ,r-rsqlite)
+       ("r-s4vectors" ,r-s4vectors)))
+    (home-page "http://bioconductor.org/packages/AnnotationDbi";)
+    (synopsis "Annotation database interface")
+    (description
+     "This package provides user interface and database connection code for
+annotation data packages using SQLite data storage.")
+    (license license:artistic2.0)))
+
 (define-public r-qtl
  (package
   (name "r-qtl")



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