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01/01: gnu: Add r-dnacopy.


From: Ricardo Wurmus
Subject: 01/01: gnu: Add r-dnacopy.
Date: Wed, 16 Mar 2016 10:23:47 +0000

rekado pushed a commit to branch master
in repository guix.

commit 247d498aaa7938efe9acbd83ea8721e477a7236d
Author: Roel Janssen <address@hidden>
Date:   Wed Mar 16 10:27:48 2016 +0100

    gnu: Add r-dnacopy.
    
    * gnu/packages/bioinformatics.scm (r-dnacopy): New variable.
---
 gnu/packages/bioinformatics.scm |   22 ++++++++++++++++++++++
 1 files changed, 22 insertions(+), 0 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 190a058..bdd4412 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3887,6 +3887,28 @@ barplots or heatmaps.")
 packages.")
     (license license:artistic2.0)))
 
+(define-public r-dnacopy
+  (package
+    (name "r-dnacopy")
+    (version "1.44.0")
+    (source (origin
+              (method url-fetch)
+              (uri (bioconductor-uri "DNAcopy" version))
+              (sha256
+               (base32
+                "1c1px4rbr36xx929hp59k7ca9k5ab66qmn8k63fk13278ncm6h66"))))
+    (properties
+     `((upstream-name . "DNAcopy")))
+    (build-system r-build-system)
+    (inputs
+     `(("gfortran" ,gfortran)))
+    (home-page "bioconductor.org/packages/DNAcopy")
+    (synopsis "Implementation of a circular binary segmentation algorithm")
+    (description "This package implements the circular binary segmentation 
(CBS)
+algorithm to segment DNA copy number data and identify genomic regions with
+abnormal copy number.")
+    (license license:gpl2+)))
+
 (define-public r-s4vectors
   (package
     (name "r-s4vectors")



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