01/03: gnu: Add r-chipseq.

[Ricardo Wurmus]

rekado pushed a commit to branch master
in repository guix.

commit 6193563a3648ae1732aa10939c8e9bf1b7e3a71d
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Jan 4 16:25:19 2017 +0100

    gnu: Add r-chipseq.
    
    * gnu/packages/bioinformatics.scm (r-chipseq): New variable.
---
 gnu/packages/bioinformatics.scm |   27 ++++++++++++++++++++++++++-
 1 file changed, 26 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index f8d7304..98d9f92 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014, 2015, 2016 Ricardo Wurmus <address@hidden>
+;;; Copyright © 2014, 2015, 2016, 2017 Ricardo Wurmus <address@hidden>
 ;;; Copyright © 2015, 2016 Ben Woodcroft <address@hidden>
 ;;; Copyright © 2015, 2016 Pjotr Prins <address@hidden>
 ;;; Copyright © 2015 Andreas Enge <address@hidden>
@@ -7869,3 +7869,28 @@ replacement for strverscmp.")
 samples into a single report.  It contains modules for a large number of
 common bioinformatics tools.")
     (license license:gpl3)))
+
+(define-public r-chipseq
+  (package
+    (name "r-chipseq")
+    (version "1.24.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "chipseq" version))
+       (sha256
+        (base32
+         "115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0"))))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biocgenerics" ,r-biocgenerics)
+       ("r-genomicranges" ,r-genomicranges)
+       ("r-iranges" ,r-iranges)
+       ("r-s4vectors" ,r-s4vectors)
+       ("r-shortread" ,r-shortread)))
+    (home-page "http://bioconductor.org/packages/chipseq";)
+    (synopsis "Package for analyzing ChIPseq data")
+    (description
+     "This package provides tools for processing short read data from ChIPseq
+experiments.")
+    (license license:artistic2.0)))