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branch core-updates updated (864a959 -> 3f9543a)
From: |
Efraim Flashner |
Subject: |
branch core-updates updated (864a959 -> 3f9543a) |
Date: |
Mon, 13 Mar 2017 17:25:29 -0400 (EDT) |
efraim pushed a change to branch core-updates
in repository guix.
from 864a959 gnu: luajit: Update to 2.1.0-beta2.
adds ce79279 gnu: python-pandas: Really fix build on 32bit.
adds ed6a21b gnu: inetutils: Disable parallel tests.
adds 63d6230 gnu: Remove obsolete numpy comment.
adds 6741676 gnu: python-numpy-documentation: Use full git commit hash
in submodule.
adds 33e9490 gnu: Add python2-cliapp.
adds 77e9941 gnu: Add python2-ttystatus.
adds c220f0b gnu: Add python2-tracing.
adds b6b2ca5 gnu: Add python2-larch.
adds 1f28b31 gnu: xf86-input-libinput: Update to 0.25.0.
adds 9f91340 gnu: octave: Build with curl and graphicsmagick.
adds d9e94c6 gnu: graphicsmagick: Build with 16 bit quantum depth.
adds 50b3982 gnu: youtube-dl: Update to 2017.03.07.
adds 1b34a47 gnu: pius: Update to 2.2.4.
adds 2704f5b gnu: ibus: Update to 1.5.15.
adds ab84c13 gnu: ibus-anthy: Update to 1.5.9.
adds 5595d4c gnu: btrfs-progs: Update to 4.10.
adds ff79717 gnu: btrfs-progs/static: Correct description.
adds f2a7ce5 gnu: Add font-tamzen.
adds d4f6f78 gnu: hiawatha: Adjust description.
adds 91c8724 Revert "gnu: neomutt: Configure with 'lmdb' and
'tokyocabinet'."
adds 469609a gnu: neomutt: Update to 20170306.
adds 5c95465 gnu: neomutt: Configure with 'lmdb' and 'kyotocabinet'.
adds fc1428d gnu: pidgin: Update to 2.12.0 [fixes CVE-2017-2640].
adds 5ded35d gnu: Add sambamba.
adds 79f09fa gnu: hmmer: Build reproducibly.
adds 82ccc49 services: Add exim-service-type.
adds fe2b643 services: Create /var/log upon activation.
adds 856be82 system: Avoid '_' as a pattern variable in 'match'.
adds 563c5d4 services: openssh: Enable PAM.
adds 1806a67 services: openssh: Remove deprecated options.
adds f895dce services: openssh: Fix 'PrintLastLog' default behaviour.
adds 97bede8 gnu: dub: Update to 1.2.2.
adds b500dc2 gnu: icestorm: Replace reference in icebox_vlog.
adds a2fa9c3 gnu: Add obnam.
adds d5eca4f gnu: Add r-diptest.
adds 1721fb4 gnu: Add r-modeltools.
adds a1f2668 gnu: Add r-flexmix.
adds 5638e15 gnu: Add r-mclust.
adds c962816 gnu: Add r-prabclus.
adds cda0720 gnu: Add r-deoptimr.
adds c0cab38 gnu: Add r-robustbase.
adds 5da4f84 gnu: Add r-trimcluster.
adds a409e8b gnu: Add r-fpc.
adds 036cd0c gnu: Add r-ape.
adds fbf45d6 gnu: vsearch: Update to 2.4.2.
adds d4cebae gnu: Add r-vgam.
adds 7711f61 gnu: Add r-pbapply.
adds e08ad76 gnu: Add r-fnn.
adds c84c8f6 gnu: wget: Fix CVE-2017-6508.
adds 4018745 doc: Update the package count.
adds 47bdc5a linux-initrd: Add a raw-initrd and use it to define
base-initrd.
adds 55fa534 gnu: Add emacs-memoize.
adds a156380 gnu: Add ghc-unexceptionalio.
adds c4b15cb gnu: imagemagick: Update to 6.9.7-10.
adds e7b9dac gnu: cuirass: Update to 0.0.1 revision 5.
adds 612af7f gnu: re2: Set CXX for cross-compilation.
adds 5578c29 gnu: phonon: Install Qt extensions.
adds 4bff300 gnu: Add phonon-backend-gstreamer.
adds 5a717a9 gnu: wine: Update to 2.3.
adds 1dbe3a8 build: GnuTLS is now a hard dependency.
adds 0392f82 gnu: Add r-minqa.
adds 21cfad4 gnu: Add r-rcppeigen.
adds aa84100 gnu: Add r-modelmetrics.
adds 545d078 gnu: Add r-matrixmodels.
adds 49dc1fa gnu: Add r-quantreg.
adds c549864 gnu: Add r-nloptr.
adds 51fc7d8 gnu: Add r-lme4.
adds a3eb8c8 gnu: Add r-pbkrtest.
adds ab2ec64 gnu: Add r-car.
adds aa890f6 gnu: Add r-caret.
adds 362ea0d gnu: Add r-rcppprogress.
adds fe68c8a gnu: Add r-mnormt.
adds 06085b5 gnu: Add r-numderiv.
adds 5a200a2 gnu: Add r-sn.
adds d1906e3 gnu: Add r-tclust.
adds 02eec38 gnu: Add r-ranger.
adds a5935d1 gnu: Add r-tsne.
adds eba5607 services: dovecot: Fix unix_listeners and fifo_listeners
path types.
adds 0a6bd10 gnu: Add le-certs.
adds 301f12e gnu: offlineimap: Update to 7.0.14.
adds 998ac26 gnu: tintin++: Use a mirror:// URI.
adds 239c226 Add 'guix pack'.
adds 334c953 syscalls: Adjust 'define-bits' to macro literal semantics
of 2.2.
adds 56aef18 services: dovecot: Reimplement proper configuration
functions.
adds 720cb10 services: Move configuration functions that shouldn't be
factorized.
adds 7e81d69 pull: Default to HTTPS.
adds 3f06f43 gnu: irssi: Update to 1.0.2.
adds 108f69c gnu: ecl: Update to 16.1.3.
adds 49a8c92 gnu: linux-libre: Update to 4.10.2.
adds 7bc57e7 gnu: address@hidden: Update to 4.9.14.
adds 59bb178 gnu: address@hidden: Update to 4.4.53.
adds 8f7ea70 gnu: guile-next: Increase max-silent-time.
adds 3288e64 gnu: r-hexbin: Update to 1.27.1-1.
adds 0216137 gnu: guile-next: Update to 2.1.8.
adds 2617050 gnu: magit: Update to 2.10.3.
adds 846344d gnu: git-modes: Update to 1.2.4.
adds 7a4dea5 gnu: manaplus: Update to 1.7.3.4.
adds 87f1c7e gnu: nss: Use 'modify-phases' syntax.
adds 4f3dcdd gnu: nss, nss-certs: Update to 3.29.3.
adds ca453df gnu: xf86-video-nouveau: Update to 1.0.14.
adds 17fb6fb gnu: xf86-video-intel: Update to 2.99.917-4-7e9e92c.
adds dd8ecb3 gnu: notmuch: Update to 0.24.
adds 8298df9 gnu: Add minizip.
adds 1bbbb0b gnu: diffoscope: Update to 78.
adds 35db2d3 gnu: Add python-htmlmin.
adds 78c5566 gnu: Add python-flask-htmlmin.
adds a71c863 gnu: Add python-flask-login.
new 3f9543a Merge remote-tracking branch 'origin/master' into
core-updates
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.am | 9 +-
build-aux/hydra/gnu-system.scm | 9 +-
build-aux/make-binary-tarball.scm | 47 --
configure.ac | 9 +-
doc/guix.texi | 207 +++++--
gnu/local.mk | 1 +
gnu/packages/admin.scm | 5 +-
gnu/packages/backup.scm | 33 +
gnu/packages/bioinformatics.scm | 143 ++++-
gnu/packages/certs.scm | 62 +-
gnu/packages/ci.scm | 6 +-
gnu/packages/compression.scm | 27 +
gnu/packages/emacs.scm | 39 +-
gnu/packages/fonts.scm | 64 ++
gnu/packages/fpga.scm | 5 +
gnu/packages/games.scm | 8 +-
gnu/packages/gnupg.scm | 4 +-
gnu/packages/gnuzilla.scm | 95 ++-
gnu/packages/guile.scm | 5 +-
gnu/packages/haskell.scm | 18 +
gnu/packages/ibus.scm | 8 +-
gnu/packages/imagemagick.scm | 6 +-
gnu/packages/irc.scm | 4 +-
gnu/packages/kde-frameworks.scm | 50 +-
gnu/packages/ldc.scm | 4 +-
gnu/packages/linux.scm | 22 +-
gnu/packages/lisp.scm | 14 +-
gnu/packages/mail.scm | 21 +-
gnu/packages/maths.scm | 5 +-
gnu/packages/messaging.scm | 4 +-
gnu/packages/package-management.scm | 4 +-
.../patches/hmmer-remove-cpu-specificity.patch | 22 +
.../patches/python-pandas-skip-failing-tests.patch | 44 +-
gnu/packages/patches/wget-CVE-2017-6508.patch | 45 ++
gnu/packages/python.scm | 194 +++++-
gnu/packages/regex.scm | 14 +-
gnu/packages/statistics.scm | 677 ++++++++++++++++++++-
gnu/packages/video.scm | 4 +-
gnu/packages/web.scm | 7 +-
gnu/packages/wget.scm | 2 +
gnu/packages/wine.scm | 9 +-
gnu/packages/xorg.scm | 14 +-
gnu/services.scm | 7 +-
gnu/services/configuration.scm | 40 --
gnu/services/cups.scm | 32 +
gnu/services/kerberos.scm | 15 +
gnu/services/mail.scm | 142 ++++-
gnu/services/ssh.scm | 42 +-
gnu/system.scm | 4 +-
gnu/system/install.scm | 63 +-
gnu/system/linux-initrd.scm | 129 ++--
guix/build/syscalls.scm | 8 +-
guix/scripts/pack.scm | 229 +++++++
guix/scripts/pull.scm | 22 +-
54 files changed, 2261 insertions(+), 442 deletions(-)
delete mode 100644 build-aux/make-binary-tarball.scm
create mode 100644 gnu/packages/patches/hmmer-remove-cpu-specificity.patch
create mode 100644 gnu/packages/patches/wget-CVE-2017-6508.patch
create mode 100644 guix/scripts/pack.scm
- branch core-updates updated (864a959 -> 3f9543a),
Efraim Flashner <=