branch core-updates updated (2857e52 -> 9f388b1)

[Mark H. Weaver]

mhw pushed a change to branch core-updates
in repository guix.

      from  2857e52   gnu: Fix a few more snippets to return #t.
      adds  f3fda29   gnu: macchanger: Update to 1.7.0.
      adds  9851688   gnu: python-betamax: Update to 0.8.1.
      adds  86c9c0c   gnu: webkitgtk: Update to 2.20.0.
      adds  36b2cb0   gnu: webkitgtk: Use HTTPS for home page.
      adds  a76c205   gnu: icecat: Relabel patches to reflect CVE assignments.
      adds  3328132   gnu: icecat: Add more fixes from upstream mozilla-esr52.
      adds  7e353a7   gnu: texlive-latex-filecontents: Declare a source 
file-name.
      adds  24dbc60   gnu: texlive-generic-ifxetex: Declare a source file-name.
      adds  ca61c6b   gnu: texlive-generic-epsf: Declare a source file-name.
      adds  88e1102   gnu: texlive-latex-fancyvrb: Declare a source file-name.
      adds  f730207   gnu: texlive-latex-graphics: Declare a source file-name.
      adds  19389bc   gnu: texlive-latex-xcolor: Declare a source file-name.
      adds  7dea311   gnu: texlive-latex-oberdiek: Declare a source file-name.
      adds  f8340ab   gnu: texlive-latex-tools: Declare a source file-name.
      adds  a26207f   gnu: texlive-latex-url: Declare a source file-name.
      adds  f4a39a5   gnu: texlive-latex-l3kernel: Declare a source file-name.
      adds  b749aa9   gnu: texlive-latex-l3packages: Declare a source file-name.
      adds  634a4a7   gnu: texlive-latex-fontspec: Declare a source file-name.
      adds  01d79c3   gnu: texlive-luatex-lualibs: Include version in source 
file-name.
      adds  320c771   gnu: texlive-latex-amsmath: Declare a source file-name.
      adds  43059ed   gnu: texlive-latex-amscls: Declare a source file-name.
      adds  8732493   gnu: texlive-latex-babel: Declare a source file-name.
      adds  51bffe7   gnu: texlive-latex-cyrillic: Declare a source file-name.
      adds  b5b10f3   gnu: texlive-latex-psnfss: Declare a source file-name.
      adds  681b579   gnu: texlive-latex-filemod: Declare a source file-name.
      adds  23ae6e6   gnu: texlive-latex-natbib: Declare a source file-name.
      adds  a74ac06   gnu: texlive-latex-seminar: Declare a source file-name.
      adds  70a71d1   gnu: texlive-latex-trimspaces: Declare a source file-name.
      adds  88ae192   gnu: texlive-tex-texinfo: Declare a source file-name.
      adds  de4eb4d   gnu: texlive-latex-anysize: Declare a source file-name.
      adds  72d5adf   gnu: texlive-latex-appendix: Declare a source file-name.
      adds  af8aa10   gnu: texlive-latex-changebar: Declare a source file-name.
      adds  4439c1d   gnu: texlive-latex-colortbl: Declare a source file-name.
      adds  62ee46b   gnu: texlive-latex-fancybox: Declare a source file-name.
      adds  e89d5cf   gnu: texlive-latex-fancyhdr: Declare a source file-name.
      adds  4fd0a59   gnu: texlive-latex-float: Declare a source file-name.
      adds  dae1d9e   gnu: texlive-latex-footmisc: Declare a source file-name.
      adds  aeb135e   gnu: texlive-latex-listings: Declare a source file-name.
      adds  aa49919   gnu: texlive-latex-jknapltx: Declare a source file-name.
      adds  ca816eb   gnu: texlive-fonts-ec: Declare a source file-name.
      adds  6f2442a   gnu: texlive-fonts-ec: Use 'invoke'.
      adds  e26de9c   gnu: texlive-fonts-rsfs: Declare a source file-name.
      adds  d5fb4a3   gnu: texlive-fonts-rsfs: Use 'invoke'.
      adds  2678a63   gnu: texlive-latex-eso-pic: Declare a source file-name.
      adds  84d6364   gnu: texlive-latex-eepic: Declare a source file-name.
      adds  6a91980   gnu: texlive-latex-multirow: Declare a source file-name.
      adds  b2aef72   gnu: texlive-latex-overpic: Declare a source file-name.
      adds  7372ce1   gnu: texlive-latex-pdfpages: Declare a source file-name.
      adds  1983537   gnu: texlive-fonts-stmaryrd: Declare a source file-name.
      adds  e1834df   gnu: texlive-latex-subfigure: Declare a source file-name.
      adds  d57e5d4   gnu: texlive-latex-threeparttable: Declare a source 
file-name.
      adds  0475e35   gnu: texlive-latex-titlesec: Declare a source file-name.
      adds  de20fd6   gnu: texlive-latex-lh: Declare a source file-name.
      adds  b4bb275   gnu: texlive-metapost: Declare a source file-name.
      adds  2cc9c01   gnu: texlive-latex-wasysym: Declare a source file-name.
      adds  66e765a   gnu: texlive-generic-pdftex: Declare a source file-name.
      adds  dac6095   gnu: python2-elib.intl: Declare a source file-name.
      adds  dba52a2   gnu: bind: Update to 9.12.1.
      adds  f8ec8d9   tests: Do not assume the bootstrap guile tarball is 
available locally.
      adds  61b1dbb   guix system: Add '--skip-checks'.
      adds  88cd7bb   services: 'shepherd-service-type' now accepts a default 
value.
      adds  bb3062a   services: Add 'virtual-terminal'.
      adds  04953dc   gnu: Add flatbuffers.
      adds  5f3616d   gnu: Add python-plotly.
      adds  3d60f42   gnu: Add r-maps.
      adds  ebc4bd5   gnu: Add r-mapproj.
      adds  9ddf420   gnu: Add Rgooglemaps.
      adds  24fb9a5   gnu: Add r-geosphere.
      adds  41835f9   gnu: Add r-subplex.
      adds  799ad71   gnu: Add r-desolve.
      adds  32cbbac   gnu: Add Diversitree.
      adds  da4dde6   gnu: Add r-jpeg.
      adds  5b19776   gnu: Add r-ggmap.
      adds  9f1c0e0   gnu: Add r-feather.
      adds  2ed0ef2   gnu: Add google-brotli.
      adds  dae7661   gnu: Add apache-arrow.
      adds  5e5ac71   gnu: Add python-pyarrow.
      adds  8d4f34d   gnu: Add python-feather-format.
      adds  71f9ca5   gnu: certbot: Update to 0.22.0.
      adds  20ecede   gnu: shadow: Fix CVE-2018-7169.
      adds  b9d0200   gnu: bind: Use INVOKE.
      adds  cd75b64   gnu: perl-lingua-en-inflect-phrase: Update to 0.20.
      adds  97c7949   gnu: perl-string-toidentifier-en: Update to 0.12.
      adds  96b4f5a   gnu: autoconf-archive: Update to 2018.03.13.
      adds  1a7cc9e   gnu: cifs-utils: Update to 6.8.
      adds  47653b3   gnu: octave: Update to 4.2.2.
      adds  8027f84   gnu: acpica: Update to 20180313.
      adds  5ade82b   gnu: r-scatterplot3d: Update to 0.3-41.
      adds  7c9b7c5   gnu: xdg-user-dirs: Update to 0.17.
      adds  7b8d3a5   gnu: gtksourceview: Update to 3.24.7.
      adds  d87d3f9   gnu: libisofs: Update to 1.4.8.
      adds  2773c24   gnu: libisofs: Fix description typos.
      adds  896bbb0   gnu: libburn: Update to 1.4.8.
      adds  fdae971   gnu: intel-gpu-tools: Update to 1.22.
      adds  35edaa2   gnu: you-get: Update to 0.4.1040.
      adds  0ab5aa0   gnu: dmenu: Update to 4.8.
      adds  e1d0f2a   vm: Use 'invoke' instead of 'system*'.
      adds  dab03ba   gnu: qtox: Wrap executable and fix misplaced comma 
(unquote).
      adds  9c7e17f   gnu: Add ghc-aeson-1.1.2.0.
      adds  78dc985   gnu: Add ghc-trifecta-1.6.2.1.
      adds  866b190   gnu: Add ghc-cheapskate-0.1.0.5.
      adds  d661ed5   gnu: idris: Provide the right versions of dependencies.
      adds  8ab10c1   linux-initrd: Move 'check-device-initrd-modules' 
elsewhere.
      adds  570d79c   gnu: address@hidden: Update to 4.14.27.
      adds  8e4ce40   gnu: linux-libre: Update to 4.15.10.
      adds  3e5783e   linux-initrd: Autoload known-module-aliases, again.
      adds  b44437c   gnu: kentutils: Build with mariadb.
      adds  46264c7   gnu: Add pigx-scrnaseq.
      adds  22d6281   gnu: Add emacs-exec-path-from-shell.
      adds  5d818b3   gnu: Add emacs-deft.
      adds  77166eb   gnu: util-linux: Fix CVE-2018-7738.
      adds  fe52a21   gnu: pigx-rnaseq: Disable memory hungry test.
      adds  c1c9cc6   gnu: Add pigx.
      adds  7f6485e   gnu: address@hidden: Update to 2.6.13 [security fixes].
      adds  1d97d8f   gnu: address@hidden: Update to 3.7.0 [security fixes].
      adds  fe1b04d   gnu: libvorbis: Replace with 1.3.6 [fixes CVE-2018-5146].
      adds  593681f   gnu: Add python2-libadalang.
      adds  363be0c   vm: Pass "-append ..." only once.
      adds  68376f6   gnu: inkscape: Build with potrace support.
      adds  9f375a4   gnu: intel-gpu-tools: Supported only on x86_64-linux and 
i686-linux.
       new  9f388b1   Merge branch 'master' into core-updates

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 doc/guix.texi                                      |  10 ++
 gnu/build/vm.scm                                   | 103 +++++------
 gnu/local.mk                                       |   2 +
 gnu/packages/ada.scm                               |  40 +++++
 gnu/packages/admin.scm                             |  13 +-
 gnu/packages/autotools.scm                         |   4 +-
 gnu/packages/bioinformatics.scm                    | 152 ++++++++++++++++
 gnu/packages/cdrom.scm                             |  14 +-
 gnu/packages/compression.scm                       |  44 +++++
 gnu/packages/cran.scm                              |   4 +-
 gnu/packages/databases.scm                         | 120 +++++++++++++
 gnu/packages/dns.scm                               |   7 +-
 gnu/packages/emacs.scm                             |  45 +++++
 gnu/packages/freedesktop.scm                       |   4 +-
 gnu/packages/geo.scm                               | 121 +++++++++++++
 gnu/packages/gnuzilla.scm                          |  30 ++--
 gnu/packages/graph.scm                             |  35 ++++
 gnu/packages/gtk.scm                               |   4 +-
 gnu/packages/idris.scm                             |  64 +++++--
 gnu/packages/image.scm                             |  21 +++
 gnu/packages/inkscape.scm                          |   1 +
 gnu/packages/java.scm                              |  44 ++---
 gnu/packages/language.scm                          |   8 +-
 gnu/packages/linux.scm                             |  11 +-
 gnu/packages/maths.scm                             |  56 +++++-
 gnu/packages/messaging.scm                         |  12 +-
 gnu/packages/networking.scm                        |  21 ++-
 gnu/packages/patches/shadow-CVE-2018-7169.patch    | 191 +++++++++++++++++++++
 .../patches/util-linux-CVE-2018-7738.patch         |  49 ++++++
 gnu/packages/python-web.scm                        |   4 +-
 gnu/packages/python.scm                            |   1 +
 gnu/packages/samba.scm                             |   4 +-
 gnu/packages/serialization.scm                     |  78 ++++++++-
 gnu/packages/suckless.scm                          |   4 +-
 gnu/packages/tex.scm                               |  82 +++++++--
 gnu/packages/tls.scm                               |   6 +-
 gnu/packages/video.scm                             |   4 +-
 gnu/packages/webkit.scm                            |  14 +-
 gnu/packages/xiph.scm                              |  15 +-
 gnu/services/base.scm                              |  67 ++++----
 gnu/services/shepherd.scm                          |  26 ++-
 gnu/system/install.scm                             |   4 +-
 gnu/system/linux-initrd.scm                        |  46 +----
 gnu/system/mapped-devices.scm                      |  51 +++++-
 guix/scripts/system.scm                            |  18 +-
 po/guix/POTFILES.in                                |   2 +-
 tests/packages.scm                                 |  19 +-
 47 files changed, 1390 insertions(+), 285 deletions(-)
 create mode 100644 gnu/packages/patches/shadow-CVE-2018-7169.patch
 create mode 100644 gnu/packages/patches/util-linux-CVE-2018-7738.patch