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02/05: gnu: java-htsjdk: Fetch sources from git.


From: Ricardo Wurmus
Subject: 02/05: gnu: java-htsjdk: Fetch sources from git.
Date: Wed, 7 Nov 2018 14:47:44 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit b8a6230df3fbbeeddb7a0e6976e0b8581bd0ab6e
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Nov 7 20:36:07 2018 +0100

    gnu: java-htsjdk: Fetch sources from git.
    
    * gnu/packages/bioinformatics.scm (java-htsjdk)[source]: Fetch from git.
---
 gnu/packages/bioinformatics.scm | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index eae5236..28d66a1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3117,14 +3117,14 @@ from high-throughput sequencing assays.")
     (name "java-htsjdk")
     (version "2.3.0") ; last version without build dependency on gradle
     (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "https://github.com/samtools/htsjdk/archive/";
-                    version ".tar.gz"))
-              (file-name (string-append name "-" version ".tar.gz"))
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/samtools/htsjdk.git";)
+                    (commit version)))
+              (file-name (git-file-name name version))
               (sha256
                (base32
-                "1ibhzzxsfc38nqyk9r8zqj6blfc1kh26iirypd4q6n90hs2m6nyq"))
+                "1b178ixcabanm834ydjl3jiakpyxdmki32hqfv2abrzn3rcwa28i"))
               (modules '((guix build utils)))
               (snippet
                ;; Delete pre-built binaries



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