01/01: gnu: r-rhtslib: Fix build.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 3153ca9d5f13492198890ea7893340737c11b85d
Author: Ricardo Wurmus <address@hidden>
Date:   Sat Apr 27 22:45:02 2019 +0200

    gnu: r-rhtslib: Fix build.
    
    * gnu/packages/bioinformatics.scm (r-rhtslib)[arguments]: Add
    "--no-staged-install" to configure flags.
---
 gnu/packages/bioinformatics.scm | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 78d6fe8..8a49e1e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8290,6 +8290,9 @@ secondary structure and comparative analysis in R.")
          "13fv78sk5g0gqfl3ks3rps3zc1k66a4lzxvgn36r7ix43yxk7hnr"))))
     (properties `((upstream-name . "Rhtslib")))
     (build-system r-build-system)
+    ;; Without this a temporary directory ends up in the Rhtslib.so binary,
+    ;; which makes R abort the build.
+    (arguments '(#:configure-flags '("--no-staged-install")))
     (propagated-inputs
      `(("r-zlibbioc" ,r-zlibbioc)))
     (inputs