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15/15: gnu: python-alembic: Update to 1.4.1.
From: |
guix-commits |
Subject: |
15/15: gnu: python-alembic: Update to 1.4.1. |
Date: |
Sun, 15 Mar 2020 10:11:13 -0400 (EDT) |
mbakke pushed a commit to branch master
in repository guix.
commit 45ebd90c186558556f2fe28ff2eb0cd424768b55
Author: Marius Bakke <address@hidden>
AuthorDate: Sun Mar 15 15:03:33 2020 +0100
gnu: python-alembic: Update to 1.4.1.
* gnu/packages/patches/python-alembic-exceptions-cause.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/databases.scm (python-alembic): Update to 1.4.1.
[source](patches): New field.
[arguments]: New field, override check phase.
---
gnu/local.mk | 1 +
gnu/packages/databases.scm | 10 +++-
.../patches/python-alembic-exceptions-cause.patch | 69 ++++++++++++++++++++++
3 files changed, 78 insertions(+), 2 deletions(-)
diff --git a/gnu/local.mk b/gnu/local.mk
index 29ca54a..3be54b2 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1320,6 +1320,7 @@ dist_patch_DATA =
\
%D%/packages/patches/python-3.8-search-paths.patch \
%D%/packages/patches/python-3.8-fix-tests.patch \
%D%/packages/patches/python-CVE-2018-14647.patch \
+ %D%/packages/patches/python-alembic-exceptions-cause.patch \
%D%/packages/patches/python-axolotl-AES-fix.patch \
%D%/packages/patches/python-cairocffi-dlopen-path.patch \
%D%/packages/patches/python-cffi-x87-stack-clean.patch \
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index a485458..be4db42 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -2613,15 +2613,21 @@ You might also want to install the following optional
dependencies:
(define-public python-alembic
(package
(name "python-alembic")
- (version "1.0.11")
+ (version "1.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "alembic" version))
+ (patches (search-patches "python-alembic-exceptions-cause.patch"))
(sha256
(base32
- "1k5hag0vahd5vrf9abx8fdj2whrwaw2iq2yp736mmxnbsn5xkdyd"))))
+ "0a4hzn76csgbf1px4f5vfm256byvjrqkgi9869nkcjrwjn35c6kr"))))
(build-system python-build-system)
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "pytest" "-vv"))))))
(native-inputs
`(("python-mock" ,python-mock)
("python-pytest-cov" ,python-pytest-cov)))
diff --git a/gnu/packages/patches/python-alembic-exceptions-cause.patch
b/gnu/packages/patches/python-alembic-exceptions-cause.patch
new file mode 100644
index 0000000..b9844e5
--- /dev/null
+++ b/gnu/packages/patches/python-alembic-exceptions-cause.patch
@@ -0,0 +1,69 @@
+Fix a test failure with newer versions of SQLalchemy due to missing
+"causes" for some exceptions.
+
+diff --git a/alembic/operations/ops.py b/alembic/operations/ops.py
+index 5ec2762..7129472 100644
+--- a/alembic/operations/ops.py
++++ b/alembic/operations/ops.py
+@@ -108,6 +108,7 @@ def from_constraint(cls, constraint):
+ "primary_key_constraint": "primary",
+ "check_constraint": "check",
+ "column_check_constraint": "check",
++ "table_or_column_check_constraint": "check",
+ }
+
+ constraint_table = sqla_compat._table_for_constraint(constraint)
+@@ -707,6 +708,7 @@ def batch_create_foreign_key(
+ "create_check_constraint", "batch_create_check_constraint"
+ )
+ @AddConstraintOp.register_add_constraint("check_constraint")
++@AddConstraintOp.register_add_constraint("table_or_column_check_constraint")
+ @AddConstraintOp.register_add_constraint("column_check_constraint")
+ class CreateCheckConstraintOp(AddConstraintOp):
+ """Represent a create check constraint operation."""
+diff --git a/alembic/testing/assertions.py b/alembic/testing/assertions.py
+index 3dc08f0..a78e5e8 100644
+--- a/alembic/testing/assertions.py
++++ b/alembic/testing/assertions.py
+@@ -2,10 +2,9 @@
+
+ import re
+
++from sqlalchemy import util
+ from sqlalchemy.engine import default
+ from sqlalchemy.testing.assertions import _expect_warnings
+-from sqlalchemy.testing.assertions import assert_raises # noqa
+-from sqlalchemy.testing.assertions import assert_raises_message # noqa
+ from sqlalchemy.testing.assertions import eq_ # noqa
+ from sqlalchemy.testing.assertions import is_ # noqa
+ from sqlalchemy.testing.assertions import is_false # noqa
+@@ -17,6 +16,29 @@
+ from ..util.compat import py3k
+
+
++def assert_raises(except_cls, callable_, *args, **kw):
++ try:
++ callable_(*args, **kw)
++ success = False
++ except except_cls:
++ success = True
++
++ # assert outside the block so it works for AssertionError too !
++ assert success, "Callable did not raise an exception"
++
++
++def assert_raises_message(except_cls, msg, callable_, *args, **kwargs):
++ try:
++ callable_(*args, **kwargs)
++ assert False, "Callable did not raise an exception"
++ except except_cls as e:
++ assert re.search(msg, util.text_type(e), re.UNICODE), "%r !~ %s" % (
++ msg,
++ e,
++ )
++ print(util.text_type(e).encode("utf-8"))
++
++
+ def eq_ignore_whitespace(a, b, msg=None):
+ # sqlalchemy.testing.assertion has this function
+ # but not with the special "!U" detection part
- 05/15: gnu: python-pyrsistent: Update to 0.15.7., (continued)
- 05/15: gnu: python-pyrsistent: Update to 0.15.7., guix-commits, 2020/03/15
- 11/15: gnu: python-sqlalchemy: Update to 1.3.15., guix-commits, 2020/03/15
- 12/15: gnu: python-psycopg2: Update to 2.8.4., guix-commits, 2020/03/15
- 03/15: gnu: python2-scikit-learn: Downgrade to 0.20.4., guix-commits, 2020/03/15
- 10/15: gnu: python-parso: Update to 0.6.2., guix-commits, 2020/03/15
- 08/15: gnu: Update python-seaborn to 0.10.0, python2-seaborn to 0.9.1., guix-commits, 2020/03/15
- 09/15: gnu: Update python-natsort to 7.0.1, python2-natsort to 6.2.1., guix-commits, 2020/03/15
- 04/15: gnu: python2-pandas: Fix build with Python 2.7.17., guix-commits, 2020/03/15
- 14/15: gnu: python-editor: Update to 1.0.4., guix-commits, 2020/03/15
- 13/15: gnu: python-jedi: Update to 0.16., guix-commits, 2020/03/15
- 15/15: gnu: python-alembic: Update to 1.4.1.,
guix-commits <=