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226/296: gnu: r-sgseq: Update to 1.22.0.
From: |
guix-commits |
Subject: |
226/296: gnu: r-sgseq: Update to 1.22.0. |
Date: |
Fri, 12 Jun 2020 19:30:34 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 201902bc0561073d5d2ce5150d0094ab15a40726
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 13 00:58:14 2020 +0200
gnu: r-sgseq: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.22.0.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioconductor.scm | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 912e987..86d2fb6 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5401,14 +5401,14 @@ alignment tool.")
(define-public r-sgseq
(package
(name "r-sgseq")
- (version "1.20.0")
+ (version "1.22.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "SGSeq" version))
(sha256
(base32
- "0950iv08wd0kjaw55rjn7m6syklvrabwr2zqq74wzyc5afyk2mrw"))))
+ "11rxx7abjyga2sdcp4x4z3n8xjx6973sckyzmh9ax6r46kwhxq8c"))))
(properties `((upstream-name . "SGSeq")))
(build-system r-build-system)
(propagated-inputs
@@ -5426,6 +5426,8 @@ alignment tool.")
("r-runit" ,r-runit)
("r-s4vectors" ,r-s4vectors)
("r-summarizedexperiment" ,r-summarizedexperiment)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/SGSeq/")
(synopsis "Splice event prediction and quantification from RNA-seq data")
(description
- 195/296: gnu: r-gofuncr: Update to 1.8.0., (continued)
- 195/296: gnu: r-gofuncr: Update to 1.8.0., guix-commits, 2020/06/12
- 198/296: gnu: r-annotationtools: Update to 1.62.0., guix-commits, 2020/06/12
- 203/296: gnu: r-gtrellis: Update to 1.20.1., guix-commits, 2020/06/12
- 206/296: gnu: r-gcrma: Update to 2.60.0., guix-commits, 2020/06/12
- 207/296: gnu: r-simpleaffy: Update to 2.64.0., guix-commits, 2020/06/12
- 209/296: gnu: r-quantro: Update to 1.22.0., guix-commits, 2020/06/12
- 218/296: gnu: r-webbioc: Update to 1.60.0., guix-commits, 2020/06/12
- 212/296: gnu: r-xbseq: Update to 1.20.0., guix-commits, 2020/06/12
- 211/296: gnu: r-roar: Update to 1.24.0., guix-commits, 2020/06/12
- 220/296: gnu: r-rbowtie2: Update to 1.10.0., guix-commits, 2020/06/12
- 226/296: gnu: r-sgseq: Update to 1.22.0.,
guix-commits <=
- 229/296: gnu: r-rqc: Update to 1.22.0., guix-commits, 2020/06/12
- 230/296: gnu: r-birewire: Update to 3.20.0., guix-commits, 2020/06/12
- 232/296: gnu: r-multidataset: Update to 1.16.0., guix-commits, 2020/06/12
- 233/296: gnu: r-ropls: Update to 1.20.0., guix-commits, 2020/06/12
- 234/296: gnu: r-biosigner: Update to 1.16.0., guix-commits, 2020/06/12
- 238/296: gnu: r-consensusclusterplus: Update to 1.52.0., guix-commits, 2020/06/12
- 118/296: gnu: r-oligo: Update to 1.52.0., guix-commits, 2020/06/12
- 144/296: gnu: r-destiny: Update to 3.2.0., guix-commits, 2020/06/12
- 235/296: gnu: r-annotatr: Update to 1.14.0., guix-commits, 2020/06/12
- 240/296: gnu: r-flowcore: Update to 2.0.1., guix-commits, 2020/06/12