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01/01: Merge branch 'master' into core-updates
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From: |
guix-commits |
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Subject: |
01/01: Merge branch 'master' into core-updates |
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Date: |
Sun, 14 Jun 2020 11:20:16 -0400 (EDT) |
mbakke pushed a commit to branch core-updates
in repository guix.
commit 4193095e18b602705df94e38a8d60ef1fe380e49
Merge: a48a3f0 e88745a
Author: Marius Bakke <marius@gnu.org>
AuthorDate: Sun Jun 14 16:24:34 2020 +0200
Merge branch 'master' into core-updates
.dir-locals.el | 8 +
Makefile.am | 28 +-
README | 25 +-
build-aux/check-channel-news.scm | 82 +
build-aux/git-authenticate.scm | 218 +--
build-aux/update-guix-package.scm | 3 +-
configure.ac | 6 +-
doc/build.scm | 39 +-
doc/contributing.texi | 13 +-
doc/guix-cookbook.texi | 179 +-
doc/guix.texi | 609 +++++--
doc/images/gcc-core-mesboot0-graph.dot | 114 ++
doc/images/gcc-mesboot-bag-graph.dot | 123 --
doc/local.mk | 2 +-
etc/completion/bash/guix | 74 +-
etc/git/pre-push | 49 +-
etc/guix-install.sh | 3 +-
etc/news.scm | 30 +
gnu/bootloader.scm | 51 +-
gnu/bootloader/depthcharge.scm | 3 +-
gnu/bootloader/extlinux.scm | 3 +-
gnu/bootloader/grub.scm | 368 ++--
gnu/build/activation.scm | 4 +-
gnu/build/file-systems.scm | 6 +-
gnu/build/hurd-boot.scm | 205 +++
gnu/build/image.scm | 60 +-
gnu/build/linux-boot.scm | 96 +-
gnu/build/shepherd.scm | 19 +-
gnu/build/vm.scm | 11 +-
gnu/ci.scm | 20 +-
gnu/image.scm | 22 +-
gnu/installer/final.scm | 22 +-
gnu/local.mk | 60 +-
gnu/packages/admin.scm | 184 +-
gnu/packages/adns.scm | 13 +-
gnu/packages/algebra.scm | 4 +-
gnu/packages/aspell.scm | 8 +-
gnu/packages/assembly.scm | 8 +-
gnu/packages/astronomy.scm | 10 +-
gnu/packages/audio.scm | 100 +-
gnu/packages/backup.scm | 53 +-
gnu/packages/base.scm | 27 +-
gnu/packages/bash.scm | 13 +-
gnu/packages/benchmark.scm | 4 +-
gnu/packages/bioconductor.scm | 1109 ++++++++-----
gnu/packages/bioinformatics.scm | 669 +++++---
gnu/packages/bittorrent.scm | 21 +-
gnu/packages/boost.scm | 43 +-
gnu/packages/bootloaders.scm | 6 +-
gnu/packages/bootstrap.scm | 8 +-
gnu/packages/build-tools.scm | 38 +
gnu/packages/busybox.scm | 20 +-
gnu/packages/c.scm | 154 +-
gnu/packages/calendar.scm | 19 +-
gnu/packages/ccache.scm | 6 +-
gnu/packages/cdrom.scm | 4 +-
gnu/packages/certs.scm | 4 +-
gnu/packages/check.scm | 38 +-
gnu/packages/ci.scm | 10 +-
gnu/packages/code.scm | 110 +-
gnu/packages/compression.scm | 26 +-
gnu/packages/cpp.scm | 10 +-
gnu/packages/cran.scm | 613 +++++--
gnu/packages/crates-io.scm | 44 +-
gnu/packages/crypto.scm | 9 +-
gnu/packages/cryptsetup.scm | 4 +-
gnu/packages/cups.scm | 12 +-
gnu/packages/cybersecurity.scm | 5 +-
gnu/packages/databases.scm | 206 ++-
gnu/packages/debug.scm | 36 +
gnu/packages/dhall.scm | 143 ++
gnu/packages/dictionaries.scm | 10 +-
gnu/packages/diffoscope.scm | 315 ++--
gnu/packages/djvu.scm | 26 +-
gnu/packages/dns.scm | 12 +-
gnu/packages/docker.scm | 12 +-
gnu/packages/documentation.scm | 2 +-
gnu/packages/dvtm.scm | 3 +-
gnu/packages/easyrpg.scm | 4 +-
gnu/packages/ebook.scm | 51 +-
gnu/packages/education.scm | 51 +-
gnu/packages/efi.scm | 8 +-
gnu/packages/elf.scm | 17 +-
gnu/packages/emacs-xyz.scm | 1749 +++++++++++---------
gnu/packages/embedded.scm | 4 +-
gnu/packages/emulators.scm | 10 +-
gnu/packages/engineering.scm | 122 +-
gnu/packages/enlightenment.scm | 130 +-
gnu/packages/file-systems.scm | 148 +-
gnu/packages/finance.scm | 43 +-
gnu/packages/fonts.scm | 57 +-
gnu/packages/fontutils.scm | 14 +
gnu/packages/fpga.scm | 4 +-
gnu/packages/freedesktop.scm | 18 +-
gnu/packages/freeipmi.scm | 8 +-
gnu/packages/game-development.scm | 144 +-
gnu/packages/games.scm | 174 +-
gnu/packages/gdb.scm | 15 +-
gnu/packages/gettext.scm | 12 +-
gnu/packages/gimp.scm | 12 +-
gnu/packages/gl.scm | 134 +-
gnu/packages/glib.scm | 10 +
gnu/packages/gnome-xyz.scm | 34 +
gnu/packages/gnome.scm | 689 +++++---
gnu/packages/gnupg.scm | 8 +-
gnu/packages/gnustep.scm | 8 +-
gnu/packages/gnuzilla.scm | 50 +-
gnu/packages/golang.scm | 528 +++++-
gnu/packages/gps.scm | 6 +-
gnu/packages/graph.scm | 4 +-
gnu/packages/graphics.scm | 178 +-
gnu/packages/graphviz.scm | 3 +-
gnu/packages/gstreamer.scm | 24 +-
gnu/packages/gtk.scm | 68 +-
gnu/packages/guile-xyz.scm | 257 ++-
gnu/packages/guile.scm | 35 +-
gnu/packages/hardware.scm | 9 +-
gnu/packages/haskell-apps.scm | 6 +-
gnu/packages/haskell-check.scm | 41 +
gnu/packages/haskell-xyz.scm | 705 +++++++-
gnu/packages/haskell.scm | 13 +-
gnu/packages/hurd.scm | 143 +-
gnu/packages/ibus.scm | 3 +-
gnu/packages/image.scm | 151 +-
gnu/packages/imagemagick.scm | 4 +-
gnu/packages/inkscape.scm | 173 ++
gnu/packages/java.scm | 21 +-
gnu/packages/julia.scm | 2 +-
gnu/packages/kde-frameworks.scm | 400 +++--
gnu/packages/kde-internet.scm | 24 +-
gnu/packages/kde-multimedia.scm | 60 +-
gnu/packages/kde-pim.scm | 337 ++--
gnu/packages/kde-plasma.scm | 16 +-
gnu/packages/kde-systemtools.scm | 36 +-
gnu/packages/kde-utils.scm | 35 +-
gnu/packages/kde.scm | 97 +-
gnu/packages/kodi.scm | 6 +-
gnu/packages/libffi.scm | 64 +-
gnu/packages/libreoffice.scm | 62 +-
gnu/packages/linux.scm | 352 ++--
gnu/packages/lisp-xyz.scm | 816 +++++++--
gnu/packages/lisp.scm | 62 +-
gnu/packages/llvm.scm | 116 +-
gnu/packages/lxde.scm | 45 +-
gnu/packages/machine-learning.scm | 51 +-
gnu/packages/mail.scm | 71 +-
gnu/packages/make-bootstrap.scm | 7 +-
gnu/packages/man.scm | 8 +-
gnu/packages/markup.scm | 2 +-
gnu/packages/maths.scm | 123 +-
gnu/packages/matrix.scm | 8 +-
gnu/packages/maven.scm | 9 +-
gnu/packages/mc.scm | 8 +-
gnu/packages/messaging.scm | 68 +-
gnu/packages/monitoring.scm | 4 +-
gnu/packages/mp3.scm | 30 +-
gnu/packages/mpd.scm | 6 +-
gnu/packages/multiprecision.scm | 26 +-
gnu/packages/music.scm | 339 +++-
gnu/packages/nano.scm | 4 +-
gnu/packages/ncdu.scm | 4 +-
gnu/packages/networking.scm | 114 +-
gnu/packages/nfs.scm | 5 +-
gnu/packages/node.scm | 13 +
gnu/packages/nss.scm | 4 +-
gnu/packages/ocaml.scm | 14 +-
gnu/packages/openkinect.scm | 141 ++
gnu/packages/package-management.scm | 18 +-
gnu/packages/pantheon.scm | 109 ++
gnu/packages/parallel.scm | 17 +-
gnu/packages/password-utils.scm | 31 +-
gnu/packages/patches/akonadi-paths.patch | 53 +-
.../patches/alsa-modular-synth-fix-vocoder.patch | 522 ++++++
gnu/packages/patches/biber-sortinithash.patch | 9 +
gnu/packages/patches/bluez-CVE-2020-0556.patch | 180 --
.../busybox-1.31.1-fix-build-with-glibc-2.31.patch | 68 +
gnu/packages/patches/calibre-msgpack-compat.patch | 18 -
gnu/packages/patches/calibre-remove-test-bs4.patch | 34 -
.../darkice-workaround-fpermissive-error.patch | 62 -
gnu/packages/patches/dbus-CVE-2020-12049.patch | 58 +
.../deja-dup-use-ref-keyword-for-iter.patch | 41 -
.../patches/emacs-libgit-use-system-libgit2.patch | 88 +
.../emacs-magit-log-format-author-margin.patch | 72 -
.../patches/emacs-zones-called-interactively.patch | 43 -
.../patches/enlightenment-fix-setuid-path.patch | 223 +--
.../patches/exercism-disable-self-update.patch | 79 +
gnu/packages/patches/git-annex-S3v4.patch | 77 -
gnu/packages/patches/grub-setup-root.patch | 124 ++
.../guile-fibers-destroy-peer-schedulers.patch | 24 +
.../guile-sqlite3-fix-cross-compilation.patch | 55 -
gnu/packages/patches/haskell-mode-make-check.patch | 35 -
.../patches/haskell-mode-unused-variables.patch | 44 -
.../http-parser-fix-assertion-on-armhf.patch | 39 +
gnu/packages/patches/hurd-xattr.patch | 53 +
gnu/packages/patches/icecat-makeicecat.patch | 4 +-
.../patches/java-openjfx-build-jdk_version.patch | 27 +
...kdepim-runtime-Fix-missing-link-libraries.patch | 42 -
.../patches/kinit-kdeinit-extra_libs.patch | 10 +-
gnu/packages/patches/kpmcore-fix-tests.patch | 30 -
.../patches/kpmcore-remove-broken-test.patch | 139 --
.../patches/lib2geom-enable-assertions.patch | 36 +
.../patches/lib2geom-link-tests-against-glib.patch | 34 +
.../patches/lib2geom-use-system-googletest.patch | 94 ++
gnu/packages/patches/libdrm-realpath-virtio.patch | 42 +
gnu/packages/patches/libdrm-symbol-check.patch | 215 ---
gnu/packages/patches/libexif-CVE-2016-6328.patch | 72 -
gnu/packages/patches/libexif-CVE-2017-7544.patch | 29 -
gnu/packages/patches/libexif-CVE-2018-20030.patch | 120 --
.../libnftnl-dont-check-NFTNL_FLOWTABLE_SIZE.patch | 47 -
.../patches/lxsession-use-gapplication.patch | 152 --
gnu/packages/patches/netsurf-system-utf8proc.patch | 51 +-
...ath.patch => network-manager-plugin-path.patch} | 0
.../patches/openscad-parser-boost-1.72.patch | 26 +
gnu/packages/patches/pidgin-libnm.patch | 60 +
gnu/packages/patches/plotutils-libpng-jmpbuf.patch | 23 -
gnu/packages/patches/pypy3-7.3.1-fix-tests.patch | 278 ++++
gnu/packages/patches/pyqt-unbundled-qt.patch | 19 -
.../patches/python-argcomplete-1.11.1-fish31.patch | 29 +
.../patches/python-shouldbe-0.1.2-cpy3.8.patch | 82 +
gnu/packages/patches/qtbase-QTBUG-81715.patch | 40 -
gnu/packages/patches/qtbase-use-TZDIR.patch | 4 +-
.../patches/ruby-sanitize-system-libxml.patch | 38 +
.../patches/transmission-CVE-2018-10756.patch | 71 +
.../patches/websocketpp-fix-for-boost-1.70.patch | 103 --
.../patches/websocketpp-fix-for-cmake-3.15.patch | 17 +
gnu/packages/patchutils.scm | 5 +-
gnu/packages/pcre.scm | 4 +-
gnu/packages/pdf.scm | 6 +-
gnu/packages/pep.scm | 349 ++++
gnu/packages/perl-check.scm | 91 +
gnu/packages/perl-compression.scm | 34 +
gnu/packages/perl.scm | 493 ++++--
gnu/packages/photo.scm | 18 +-
gnu/packages/php.scm | 4 +-
gnu/packages/plotutils.scm | 24 +-
gnu/packages/popt.scm | 12 +-
gnu/packages/pretty-print.scm | 18 +-
gnu/packages/python-check.scm | 23 +
gnu/packages/python-crypto.scm | 56 +-
gnu/packages/python-web.scm | 338 +++-
gnu/packages/python-xyz.scm | 545 ++++--
gnu/packages/python.scm | 171 ++
gnu/packages/qt.scm | 379 +++--
gnu/packages/radio.scm | 28 +-
gnu/packages/rails.scm | 6 -
gnu/packages/readline.scm | 8 +-
gnu/packages/regex.scm | 6 +-
gnu/packages/rpc.scm | 49 +
gnu/packages/ruby.scm | 858 ++++++++--
gnu/packages/rust-apps.scm | 14 +-
gnu/packages/rust.scm | 2 +-
gnu/packages/samba.scm | 32 +-
gnu/packages/scanner.scm | 8 +-
gnu/packages/scheme.scm | 2 +-
gnu/packages/screen.scm | 7 +-
gnu/packages/search.scm | 8 +-
gnu/packages/security-token.scm | 12 +-
gnu/packages/serialization.scm | 4 +-
gnu/packages/shells.scm | 96 +-
gnu/packages/skarnet.scm | 12 +-
gnu/packages/spice.scm | 19 +-
gnu/packages/ssh.scm | 18 +-
gnu/packages/statistics.scm | 132 +-
gnu/packages/suckless.scm | 134 +-
gnu/packages/sync.scm | 6 +-
gnu/packages/syncthing.scm | 51 +-
gnu/packages/syndication.scm | 70 +-
gnu/packages/task-management.scm | 2 +-
gnu/packages/terminals.scm | 24 +-
gnu/packages/tex.scm | 69 +-
gnu/packages/text-editors.scm | 93 +-
gnu/packages/textutils.scm | 106 ++
gnu/packages/tls.scm | 11 +-
gnu/packages/tmux.scm | 6 +-
gnu/packages/valgrind.scm | 6 +-
gnu/packages/version-control.scm | 44 +-
gnu/packages/video.scm | 96 +-
gnu/packages/vim.scm | 28 +
gnu/packages/virtualization.scm | 44 +-
gnu/packages/vpn.scm | 69 +-
gnu/packages/vulkan.scm | 190 +--
gnu/packages/w3m.scm | 5 +-
gnu/packages/web-browsers.scm | 54 +-
gnu/packages/web.scm | 362 ++--
gnu/packages/webkit.scm | 4 +-
gnu/packages/wm.scm | 323 ++--
gnu/packages/xdisorg.scm | 201 ++-
gnu/packages/xfce.scm | 16 +-
gnu/packages/xml.scm | 12 +-
gnu/packages/xorg.scm | 2 +-
gnu/services.scm | 37 +
gnu/services/cups.scm | 2 +-
gnu/services/desktop.scm | 29 +-
gnu/services/docker.scm | 20 +-
gnu/services/hurd.scm | 118 ++
gnu/services/nfs.scm | 14 +-
gnu/services/xorg.scm | 161 +-
gnu/system.scm | 171 +-
gnu/system/examples/bare-bones.tmpl | 3 +-
gnu/system/examples/bare-hurd.tmpl | 54 +
gnu/system/file-systems.scm | 86 +
gnu/system/hurd.scm | 242 +--
gnu/system/image.scm | 212 ++-
gnu/system/install.scm | 11 +-
gnu/system/vm.scm | 69 +-
gnu/tests/install.scm | 107 +-
guix/build-system/asdf.scm | 5 +-
guix/build-system/cargo.scm | 3 +
guix/build-system/go.scm | 3 +
guix/build-system/guile.scm | 6 +
guix/build-system/linux-module.scm | 4 +
guix/build-system/r.scm | 4 +-
guix/build/asdf-build-system.scm | 54 +-
guix/build/cargo-build-system.scm | 13 +-
guix/build/compile.scm | 3 +-
guix/build/go-build-system.scm | 7 +-
guix/build/linux-module-build-system.scm | 11 +-
guix/build/minify-build-system.scm | 9 +-
guix/build/syscalls.scm | 22 +-
guix/channels.scm | 160 +-
guix/combinators.scm | 3 +-
guix/download.scm | 4 +
guix/gexp.scm | 6 +-
guix/git-authenticate.scm | 334 ++++
guix/git.scm | 65 +-
guix/grafts.scm | 85 +-
guix/import/cran.scm | 4 +-
guix/import/opam.scm | 2 +-
guix/import/stackage.scm | 2 +-
guix/import/utils.scm | 2 +-
guix/lint.scm | 72 +-
guix/packages.scm | 260 ++-
guix/profiles.scm | 8 +-
guix/quirks.scm | 16 +-
guix/scripts/describe.scm | 17 +-
guix/scripts/download.scm | 26 +-
guix/scripts/hash.scm | 35 +-
guix/scripts/package.scm | 20 +-
guix/scripts/publish.scm | 1 +
guix/scripts/pull.scm | 35 +-
guix/scripts/size.scm | 4 +-
guix/scripts/system.scm | 18 +-
guix/self.scm | 10 +-
guix/store.scm | 70 +-
guix/store/database.scm | 191 ++-
guix/tests.scm | 2 +-
guix/tests/git.scm | 28 +-
guix/tests/gnupg.scm | 52 +
guix/ui.scm | 57 +-
guix/upstream.scm | 5 +-
guix/utils.scm | 59 +-
m4/guix.m4 | 22 +-
nix/libstore/gc.cc | 5 +-
nix/local.mk | 1 +
tests/challenge.scm | 6 +-
tests/channels.scm | 47 +-
tests/derivations.scm | 65 +-
tests/ed25519bis.key | 10 +
tests/ed25519bis.sec | 10 +
tests/file-systems.scm | 64 +
tests/gexp.scm | 17 +-
tests/git-authenticate.scm | 356 ++++
tests/git.scm | 45 +-
tests/graph.scm | 6 +-
tests/guix-hash.sh | 7 +-
tests/guix-package-net.sh | 12 +
tests/guix-system.sh | 7 +-
tests/lint.scm | 30 +
tests/packages.scm | 86 +-
tests/store.scm | 20 +-
tests/syscalls.scm | 20 +-
371 files changed, 20661 insertions(+), 9752 deletions(-)
diff --cc gnu/packages/libffi.scm
index e058692,36f6e5e..97a3beb
--- a/gnu/packages/libffi.scm
+++ b/gnu/packages/libffi.scm
@@@ -2,9 -2,9 +2,9 @@@
;;; Copyright © 2012, 2013, 2014 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2014 Federico Beffa <beffa@fbengineering.ch>
;;; Copyright © 2015, 2019 Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
-;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 Ben Woodcroft <donttrustben@gmail.com>
- ;;; Copyright © 2017, 2019 Marius Bakke <mbakke@fastmail.com>
+ ;;; Copyright © 2017, 2019, 2020 Marius Bakke <marius@gnu.org>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;