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03/04: gnu: Add r-phylogram.
From: |
guix-commits |
Subject: |
03/04: gnu: Add r-phylogram. |
Date: |
Tue, 23 Jun 2020 07:43:22 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit f9b3718568f00ffe06d5237761f440bcb7a28ada
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Jun 23 13:41:50 2020 +0200
gnu: Add r-phylogram.
* gnu/packages/cran.scm (r-phylogram): New variable.
Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
---
gnu/packages/cran.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index e81d11e..d07d63d 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -22274,3 +22274,28 @@ a Python script to demultiplex libraries and trim off
primer sequences. With
a standard alignment software the required bam files can be then be
generated.")
(license license:gpl3+)))
+
+(define-public r-phylogram
+ (package
+ (name "r-phylogram")
+ (version "2.1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "phylogram" version))
+ (sha256
+ (base32 "1p4h5pirc0m5pzc18q0jk3mcmb5n48gdf9abz03vml3a209xxl2v"))))
+ (properties `((upstream-name . "phylogram")))
+ (build-system r-build-system)
+ (propagated-inputs `(("r-ape" ,r-ape)))
+ (home-page "https://github.com/ropensci/phylogram/")
+ (synopsis "Dendrograms for evolutionary analysis")
+ (description
+ "The @code{r-phylogram} package is a tool for for developing phylogenetic
+trees as deeply-nested lists known as \"dendrogram\" objects. It provides
+functions for conversion between \"dendrogram\" and \"phylo\" class objects,
+as well as several tools for command-line tree manipulation and import/export
+via Newick parenthetic text. This improves accessibility to the comprehensive
+range of object-specific analytical and tree-visualization functions found
+across a wide array of bioinformatic R packages.")
+ (license license:gpl3)))