[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
branch master updated: gnu: Add r-ciara.
From: |
guix-commits |
Subject: |
branch master updated: gnu: Add r-ciara. |
Date: |
Tue, 09 Aug 2022 04:53:49 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 2efc787811 gnu: Add r-ciara.
2efc787811 is described below
commit 2efc787811a2c4586b763aeed319cb3777e7aa37
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Aug 9 10:45:05 2022 +0200
gnu: Add r-ciara.
* gnu/packages/bioconductor.scm (r-ciara): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index fd9ff0c678..1bb8c0d406 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11989,6 +11989,30 @@ genes in the gene-set that are ranked above the
leading edge).")
"This package provides a pipeline for analysing Capture Hi-C data.")
(license license:artistic2.0)))
+;; This is a CRAN package, but it depends on Bioconductor packages, so we put
+;; it here.
+(define-public r-ciara
+ (package
+ (name "r-ciara")
+ (version "0.1.0")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "CIARA" version))
+ (sha256
+ (base32
+ "0nr7wks9231326x0lhpbh824c6vcb5hr5jn89s9bmg9mci907bsf"))))
+ (properties `((upstream-name . "CIARA")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biobase r-ggplot2 r-ggraph r-magrittr))
+ (native-inputs (list r-knitr))
+ (home-page "https://cran.r-project.org/package=CIARA")
+ (synopsis "Cluster-independent algorithm for rare cell types
identification")
+ (description
+ "This is a package to support identification of markers of rare cell
+types by looking at genes whose expression is confined in small regions of the
+expression space.")
+ (license license:artistic2.0)))
+
(define-public r-cicero
(package
(name "r-cicero")
[Prev in Thread] |
Current Thread |
[Next in Thread] |
- branch master updated: gnu: Add r-ciara.,
guix-commits <=