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branch master updated: gnu: Add python-bcbio-gff.
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guix-commits |
Subject: |
branch master updated: gnu: Add python-bcbio-gff. |
Date: |
Tue, 03 Jan 2023 09:46:03 -0500 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new cad1789b3e gnu: Add python-bcbio-gff.
cad1789b3e is described below
commit cad1789b3ea7317fd41a6a26c633a0ee88fe7a81
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Jan 3 15:41:19 2023 +0100
gnu: Add python-bcbio-gff.
* gnu/packages/bioinformatics.scm (python-bcbio-gff): New variable.
---
gnu/packages/bioinformatics.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 46febf579a..a92589eef7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -907,6 +907,26 @@ input/output delimiter. When the new functionality is not
used, bioawk is
intended to behave exactly the same as the original BWK awk.")
(license license:x11)))
+(define-public python-bcbio-gff
+ (package
+ (name "python-bcbio-gff")
+ (version "0.6.9")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "bcbio-gff" version))
+ (sha256
+ (base32
+ "1pm1szyxabhn8jismrj9cjhf88ajgcmm39f0cgf36iagw5qakprl"))))
+ (build-system pyproject-build-system)
+ (propagated-inputs (list python-biopython python-six))
+ (native-inputs (list python-pytest))
+ (home-page "https://github.com/chapmanb/bcbb/tree/master/gff")
+ (synopsis "Read and write GFF files with Biopython integration")
+ (description
+ "This package lets you read and write files in Generic Feature
+Format (GFF) with Biopython integration.")
+ (license (license:non-copyleft "http://www.biopython.org/DIST/LICENSE"))))
+
(define-public python-cellbender
(package
(name "python-cellbender")
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