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03/15: gnu: methyldackel: Simplify arguments.
From: |
guix-commits |
Subject: |
03/15: gnu: methyldackel: Simplify arguments. |
Date: |
Fri, 12 May 2023 17:25:43 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 7a199bb74c263ee609ff5468db6501eb20820bde
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri May 12 22:24:30 2023 +0200
gnu: methyldackel: Simplify arguments.
* gnu/packages/bioinformatics.scm (methyldackel)[arguments]: Use list, drop
argument list.
[native-inputs]: Drop package label.
---
gnu/packages/bioinformatics.scm | 19 ++++++++++---------
1 file changed, 10 insertions(+), 9 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 99344b168a..c798cc5e72 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -17856,15 +17856,16 @@ patterns.")
"1sfhf2ap75qxpnmy1ifgmxqs18rq8mah9mcgkby73vc6h0sw99ws"))))
(build-system gnu-build-system)
(arguments
- `(#:test-target "test"
- #:make-flags
- ,#~(list "CC=gcc"
- "CFLAGS=-fcommon"
- (string-append "prefix=" #$output "/bin/"))
- #:phases
- (modify-phases %standard-phases
+ (list
+ #:test-target "test"
+ #:make-flags
+ #~(list "CC=gcc"
+ "CFLAGS=-fcommon"
+ (string-append "prefix=" #$output "/bin/"))
+ #:phases
+ '(modify-phases %standard-phases
(replace 'configure
- (lambda* (#:key outputs #:allow-other-keys)
+ (lambda _
(substitute* "Makefile"
(("-lhts ") "-lhts -lBigWig ")
(("install MethylDackel \\$\\(prefix\\)" match)
@@ -17874,7 +17875,7 @@ patterns.")
htslib-1.9 libbigwig zlib))
;; Needed for tests
(native-inputs
- `(("python" ,python-wrapper)))
+ (list python-wrapper))
(home-page "https://github.com/dpryan79/MethylDackel")
(synopsis "Universal methylation extractor for BS-seq experiments")
(description
- branch master updated (0e20ed322d -> d67a3622ef), guix-commits, 2023/05/12
- 01/15: gnu: ribotaper: Simplify with G-expression., guix-commits, 2023/05/12
- 03/15: gnu: methyldackel: Simplify arguments.,
guix-commits <=
- 02/15: gnu: phast: Simplify by using G-expression., guix-commits, 2023/05/12
- 06/15: gnu: samblaster: Update to 0.1.26., guix-commits, 2023/05/12
- 04/15: gnu: methyldackel: Update to 0.6.1., guix-commits, 2023/05/12
- 07/15: gnu: multichoose: Clean up., guix-commits, 2023/05/12
- 08/15: gnu: arriba: Use SEARCH-INPUT-FILE and -DIRECTORY., guix-commits, 2023/05/12
- 11/15: gnu: python-seaborn: Simplify by using pyproject-build-system., guix-commits, 2023/05/12
- 12/15: gnu: python-pyproject-metadata: Simplify by using pyproject-build-system., guix-commits, 2023/05/12
- 14/15: gnu: python-orjson: Reuse phases from pyproject-build-system., guix-commits, 2023/05/12
- 09/15: gnu: jamm: Use G-expression., guix-commits, 2023/05/12
- 10/15: gnu: shrinkwrap: Use pyproject-build-system., guix-commits, 2023/05/12