>From 80d296f9d3bc205eed06f98821bb5abd3ad8d40f Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Tue, 26 Apr 2016 19:35:10 +0200 Subject: [PATCH] gnu: Add multichoose. * gnu/packages/bioinformatics.scm (multichoose): New variable. --- gnu/packages/bioinformatics.scm | 34 ++++++++++++++++++++++++++++++++++ 1 file changed, 34 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 620439f..b3686b6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5075,6 +5075,40 @@ the same group, and look for consistent differences between ChIP and control group or two ChIP groups run under different conditions.") (license license:gpl3+))) +(define-public multichoose + (package + (name "multichoose") + (version "1.0.3") + (source (origin + (method url-fetch) + (uri (string-append "https://github.com/ekg/multichoose/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 "0xy86vvr3qrs4l81qis7ia1q2hnqv0xcb4a1n60smxbhqqis5w3l")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; There are no tests to run. + #:phases + (modify-phases %standard-phases + (delete 'configure) ; There is no configure phase. + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((bin (string-append (assoc-ref outputs "out") "/bin"))) + (install-file "multichoose" bin) + (install-file "multipermute" bin))))))) + (native-inputs + `(("python" ,python-2) + ("node" ,node))) + (home-page "https://github.com/ekg/multichoose") + (synopsis "Library for loopless multiset combination generation") + (description "This package provides a library implementing an efficient +loopless multiset combination generation algorithm which is (approximately) +described in \"Loopless algorithms for generating permutations, combinations, +and other combinatorial configurations.\" G Ehrlich - Journal of the ACM (JACM), +1973. (Algorithm 7.)") + (license license:expat))) + (define-public filevercmp (let ((commit "1a9b779b93d0b244040274794d402106907b71b7")) (package -- 2.7.4