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[bug#55298] [PATCH 0/1] Do not propagate cwltool inputs.
From: |
Ludovic Courtès |
Subject: |
[bug#55298] [PATCH 0/1] Do not propagate cwltool inputs. |
Date: |
Wed, 11 May 2022 00:48:45 +0200 |
User-agent: |
Gnus/5.13 (Gnus v5.13) Emacs/27.2 (gnu/linux) |
Hi,
Arun Isaac <arunisaac@systemreboot.net> skribis:
> cwltool is a command-line tool, not a python library. So, its dependencies
> should be regular inputs, not propagated inputs. In fact, as it stands
> currently, installing cwltool fails due to a package conflict.
>
> $ guix install cwltool
> The following package would be installed:
> cwltool 3.1.20220119140128
>
> guix install: error: profile contains conflicting entries for python-rdflib
> guix install: error: first entry: python-rdflib@5.0.0
> /gnu/store/lxy384l7avd0q4dmfs0zywllb9221y7x-python-rdflib-5.0.0
> guix install: error: ... propagated from python-prov@2.0.0
> guix install: error: ... propagated from cwltool@3.1.20220119140128
> guix install: error: second entry: python-rdflib@6.1.1
> /gnu/store/2f88f2w44zsvmx8m6ymp1fywiw1h379x-python-rdflib-6.1.1
> guix install: error: ... propagated from python-rdflib-jsonld@0.6.2
> guix install: error: ... propagated from
> python-schema-salad@8.2.20211116214159
> guix install: error: ... propagated from cwltool@3.1.20220119140128
> hint: You cannot have two different versions or variants of `cwltool' in the
> same profile.
>
> Arun Isaac (1):
> gnu: cwltool: Do not propagate inputs.
>
> gnu/packages/bioinformatics.scm | 2 +-
> 1 file changed, 1 insertion(+), 1 deletion(-)
You forgot to send the actual patch, but I think removing propagated
inputs in this case is a good idea. Got for it!
Thanks,
Ludo’.