[Health-dev] GNU Health/FHIR REST server - help needed

[Adrian Hodson]

Hi all.

For those following the SAO issue I raised yesterday, our dear leader
Luis solved it with this comment:

"Looks like you're using SAO v 4.x . You need 3.8 for GNU Health 3.0.x"

Now I am trying to run fhir/run_server.py. There are a few
errors, one to do with logging which I fixed. "pip install -r
requirements.txt" goes well. (see below)

When I execute the server I get a database error:
object has no attribute 'database_name' 
(see the full message below). 

The config file is also below.

I intend to do the nginx+tornado+flask config but for now I am just
following the Wiki.

Please, do you have any advice?

Thank you and best wishes.



## Database Error ##
address@hidden:~
$ /usr/bin/python2 /opt/gnuhealth/tryton/fhir/run_server.py
/opt/gnuhealth/.local/lib/python2.7/site-packages/flask/exthook.py:71:ExtDeprecationWarning:
Importing flask.ext.login is deprecated, use flask_login
instead.  .format(x=modname),
ExtDeprecationWarning 
/opt/gnuhealth/.local/lib/python2.7/site-packages/flask/exthook.py:71:ExtDeprecationWarning:Importing
flask.ext.tryton is deprecated, use flask_tryton
instead.  .format(x=modname),
ExtDeprecationWarning 
/opt/gnuhealth/.local/lib/python2.7/site-packages/flask/exthook.py:71:ExtDeprecationWarning:Importing
flask.ext.restful is deprecated, use flask_restful
instead.  .format(x=modname), ExtDeprecationWarning Traceback (most
recent call last): File "/opt/gnuhealth/tryton/fhir/run_server.py",
line 12, in <module> app = create_app() #DebugConfig File
"/opt/gnuhealth/tryton/fhir/server/app.py", line 24, in create_app
tryton.init_app(app) File
"/opt/gnuhealth/.local/lib/python2.7/site-packages/flask_tryton.py",
line 54, in init_app self.pool = Pool(database) File
"/opt/gnuhealth/tryton/server/trytond-3.8.5/trytond/pool.py", line 58,
in __new__ database_name = Transaction().cursor.database_name
AttributeError: 'NoneType' object has no attribute 'database_name'



## Python  ##
address@hidden:~/tryton/server/config $ pip2 freeze --user
aniso8601==1.1.0
backports.ssl-match-hostname==3.5.0.1
caldav==0.4.0
certifi==2016.2.28
click==6.6
coverage==4.0.3
cracklib==2.9.3
defusedxml==0.4.1
Flask==0.11
Flask-Login==0.2.11
Flask-RESTful==0.3.5
flask-tryton==0.5
Flask-WTF==0.12
Genshi==0.7
itsdangerous==0.24
lxml==3.6.0
nose==1.3.7
Pillow==3.0.0
polib==1.0.7
psycopg2==2.6.1
python-dateutil==2.5.3
python-ldap==2.4.20
python-sql==0.8
python-stdnum==1.2
pytz==2016.4
PyWebDAV==0.9.8
qrcode==5.3
relatorio==0.6.2
requests==2.10.0
simpleeval==0.8.7
six==1.10.0
tornado==4.3
vobject==0.9.2
Werkzeug==0.11.10
wrapt==1.10.8
WTForms==2.1


## CONFIG ## 
address@hidden:~ $ head tryton/fhir/config.py
==> tryton/fhir/config.py <==
class ProductionConfig(object):
    """A basic production config
    """
    TRYTON_DATABASE = 'gnuhealth'
    SECRET_KEY = 'fqU1nHlFiDt4UgdjAKfQypt0X3OOgRNxrzX6BYSM'
    SERVER_NAME = 'localhost'
    TRYTON_CONFIG = '/opt/gnuhealth/tryton/server/config/trytond.conf'