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Re: [igraph] install w/anaconda?

From: David Robinson
Subject: Re: [igraph] install w/anaconda?
Date: Thu, 29 Aug 2013 18:58:57 -0600


I apologize for the installation question, but I've been moving from platform 
to platform to keep customers happy. Getting Python (and packages) loaded on 
the various Windows platforms drove me to the edge of insanity. I'm back on a 
Mac and I thought things were going to be simpler. The particulars are: Python 
2.7.5 (via anaconda), OS X 10.7.5 (Lion).  (Using the usual package 
installation route, I ran into scipy install problems no finding gfortran so I 
just went with Anaconda. ) 

Anaconda is different in that the entire python system and packages are 
installed relative to this python:
% which python
% /Users/drobin/anaconda/bin/python

This effective moves everything to ~/anaconda/bin, ~/anaconda/lib, etc.  
Installers such as pip, brew, easy_install are still available, but the install 
locations are relative to ~/anaconda . 

I tried to adapt the instructions in the following message to my case:


On the off-chance it will help, here is the output from running make on the 

rover:graph-0.6.5 drobin$ make 
…………… snip …. 
libigraph_la-igraph_fixed_vectorlist.lo libigraph_la-separators.lo 
libigraph_la-igraph_marked_queue.lo libigraph_la-igraph_estack.lo 
libigraph_la-st-cuts.lo libigraph_la-cohesive_blocks.lo 
libigraph_la-statusbar.lo libigraph_la-lapack.lo libigraph_la-complex.lo 
libigraph_la-eigen.lo libigraph_la-feedback_arc_set.lo libigraph_la-sugiyama.lo 
libigraph_la-glpk_support.lo libigraph_la-igraph_hrg_types.lo 
libigraph_la-igraph_hrg.lo libigraph_la-distances.lo 
libigraph_la-fortran_intrinsics.lo libigraph_la-matching.lo libigraph_la-scg.lo 
libigraph_la-scg_approximate_methods.lo libigraph_la-scg_exact_scg.lo 
libigraph_la-scg_kmeans.lo libigraph_la-scg_utils.lo 
libigraph_la-scg_optimal_method.lo libigraph_la-qsort.lo 
libigraph_la-qsort_r.lo libigraph_la-types.lo libigraph_la-hacks.lo  -lm 
-L/Users/drobin/anaconda/lib -lxml2 -lz -liconv -lm libf2c.la libblas.la 
liblapack.la libdlamch.la libarpack.la libglpk.la libplfit.la 
grep: /usr/lib/libiconv.la: No such file or directory
sed: /usr/lib/libiconv.la: No such file or directory
libtool: link: `/usr/lib/libiconv.la' is not a valid libtool archive
make[3]: *** [libigraph.la] Error 1
make[2]: *** [all] Error 2
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
rover:igraph-0.6.5 drobin$ 

On the one hand it feels like a path problem, but something else is amiss I'm 
Many thanks for any suggestions.  


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