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Re: [igraph] infomap unresponsive? on large graph in R env

From: Alexander Struck
Subject: Re: [igraph] infomap unresponsive? on large graph in R env
Date: Mon, 12 May 2014 13:42:38 +0200


has anyone any info on a memory limit of igraph which I may have missed in the 
I'd really like to use igraph's implementation of InfoMap but run into the 
problem described below.


On May 6, 2014, at 11:21 AM, Alexander Struck <address@hidden> wrote:

> Dear all,
> while InfoMap runs smoothly on small graphs it appears to become unresponsive 
> on larger ones. My .RObj has the size of 28 MB and igraph reports:
>> G
> IGRAPH DN-- 1282336 2507034 -- 
> + attr: name (v/c)
> The R v3.0.2 process now runs 14+ hours on one core out of 16, Ubuntu 12.04 
> uses 16 of the available 72 GB RAM.  The latest igraph library version is 
> installed.
> Should I be more patient? What are my options here? I could make the .RObj 
> available on request.
> Many thanks and best regards,
> Alexander
> _______________________________________________
> igraph-help mailing list
> address@hidden
> https://lists.nongnu.org/mailman/listinfo/igraph-help


Image Knowledge Gestaltung. An Interdisciplinary Laboratory     
Cluster of Excellence Humboldt-Universität zu Berlin    

Alexander Struck        
Shaping Knowledge 

Phone: +49 30 2093 46192        
E-Mail:  address@hidden 
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