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Re: Octave on PBS Job Array
From: |
Julien Salort |
Subject: |
Re: Octave on PBS Job Array |
Date: |
Tue, 26 Jun 2012 18:10:59 +0200 |
User-agent: |
Gnus/5.13 (Gnus v5.13) Emacs/23.3 (darwin) |
mathan <address@hidden> writes:
> The following error has occurring when i submit the job in PBS but the .m
> file is running without any problem when i execute it from bash program
> interactively( Not in PBS )
>
> *octave: error while loading shared libraries: libgfortran.so.3: cannot open
> shared object file: No such file or directory*
I've had a similar problem recently, which was caused by system version
mismatches.
I'd check the following:
- The Octave binary you are using, was it compiled on the same system
version as the one on the cluster node ? Typically, I had compiled
for CentOS6 and tried to execute on a CentOS5 node where the library
versions I linked against were not available ;
- Have you checked that the environment variables are ok on the node ?
(ie. LD_LIBRARY_PATH, ...)
so that the required dynamic libraries can be found...
Hope that helps,
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