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Re: Output ONLY sig. level in binary logistic regression
From: |
Ben Pfaff |
Subject: |
Re: Output ONLY sig. level in binary logistic regression |
Date: |
Tue, 14 Dec 2021 08:28:50 -0800 |
It might be even easier to postprocess if you use the CVS output
format (add "-O format=csv" to the command line).
On Tue, Dec 14, 2021 at 1:45 AM Oren Ish-Shalom
<tuna.is.good.for.you@gmail.com> wrote:
>
> Thanks John, Markus ! I'll use that !
>
> On Tue, 14 Dec 2021 at 11:41, John Darrington <john@darrington.wattle.id.au>
> wrote:
>>
>> I concur with Markus. Probably the easiest way to do what you want
>> is with a command similar to:
>>
>> pspp regression.sps | awk -F '|' '/Step 1 depth/{print $7}'
>>
>> J'
>>
>>
>> On Tue, Dec 14, 2021 at 07:36:05AM +0000, Quandt, Markus wrote:
>> Hi,
>>
>> I don???t think you can do this in PSPP syntax (but would be happy to
>> be corrected).
>>
>> But since you are working on a Unix/Linux system anyway, why not ask
>> someone who is familiar with regex (regular expression) to parse the output
>> file and write out the ???hits??? to a separate csv file? Sorry, I cannot
>> help with the specific regex syntax, as I am not a Unix person.
>>
>> Best,
>> Markus
>>
>> Von: Pspp-users <pspp-users-bounces+markus.quandt=gesis.org@gnu.org> Im
>> Auftrag von Oren Ish-Shalom
>> Gesendet: Dienstag, 14. Dezember 2021 06:12
>> An: pspp-users@gnu.org
>> Betreff: Output ONLY sig. level in binary logistic regression
>>
>>
>> Hi all,
>> I???m running 200,000 binary logistic regressions
>> (loop from a bash linux terminal)
>> I???m only interested in extracting the significance level.
>> Here is my sps script:
>>
>> GET DATA
>>
>> /TYPE=TXT
>>
>> /FILE='example_data.csv'
>>
>> /DELIMITERS=','
>>
>> /FIRSTCASE=2
>>
>> /VARIABLES=
>>
>> serial F32
>>
>> gene A64
>>
>> time F8.8
>>
>> survived F1.
>>
>>
>>
>> LOGISTIC REGRESSION survived WITH time.
>>
>> EXECUTE.
>>
>> When I run it I get three tables but only need the significance (0.436
>> here):
>>
>> Variables in the Equation
>>
>> +---------------+-----+----+----+--+----+------+
>>
>> | | B |S.E.|Wald|df|Sig.|Exp(B)|
>>
>> +---------------+-----+----+----+--+----+------+
>>
>> |Step 1 depth | 2.36|3.03| .61| 1|.436| 10.62|
>>
>> | Constant|-2.75|2.90| .90| 1|.344| .06|
>>
>> +---------------+-----+----+----+--+----+------+
>>
>> Any way to print just this value ?
>> Thanks !