[Savannah-hackers] Re: submission of A system for estimation of codon substitution of genomic fragments - savannah.nongnu.org

[Mathieu Roy]

Hi,

I'm evaluating the project you submitted for approval in Savannah.



address@hidden said:

> A package was submitted to savannah.nongnu.org
> This mail was sent to address@hidden, address@hidden
> 
> Estienne Swart <address@hidden> described the package as follows:
> License: gpl
> Other License: 
> Package: A system for estimation of codon substitution of genomic fragments
> System name: frags
> Type: non-GNU
> 
> Description:
> This software is used for studies of Molecular Evolution and Genomics. It is 
> currently used to process a wide variety of different types of sequence data 
> from different genomics projects, in order to obtain coding sequence 
> alignments prior to calculation of substitution rates. The source code can be 
> obtained here: http://www.sanbi.ac.za/cgi-bin/estienne/viewcvs.cgi/progs 

 In order to release your project properly and unambiguously 
under the GPL, please place copyright notices and permission-to-copy
statements at the beginning of every file of source code.

In addition, if you haven't already, please copy a copy of the plain
text version of the GPL, available from
(http://www.gnu.org/licenses/gpl.txt), into a file named "COPYING".

Additional instructions are available from
http://www.gnu.org/licenses/gpl-howto.html.

The GPL FAQ explains why these procedures must be followed.  To learn
why a copy of the GPL must be included with every copy of the code,
for example, go to
http://www.gnu.org/licenses/gpl-faq.html#WhyMustIInclude


> . It is written in Python, and was developed on a number of *nix
> platforms, primarily GNU/Linux. It leverages databases, utilities,
> and source code from existing Open Source Projects (Ensembl,
> Genewise, MUMmer, MySQL, BioPython, Paml etc.).
> 
> Other Software Required:
> MUMmer, BioPython, Numeric Python, Ensembl databases, Paml, BLAST, MySQL

Can you confirm that all these software are free software?
> 
> Other Comments: I'm not entirely sure whether this is a suitable
> location for this project

It's ok for us.


Please register your project once more with the changes
mentioned above.  

We cannot track projects that have been answered but not approved, so
we must ask you to register the project whenever you change the
registration. Make sure to apply all changes so you need to reregister
only once.

The re-registration URL found in our acknowledgement of your earlier
registration will direct you to the proper location.

Regards,


-- 
Mathieu Roy
 
  Homepage:
    http://yeupou.coleumes.org
  Not a native english speaker: 
    http://stock.coleumes.org/doc.php?i=/misc-files/flawed-english